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  5. Pnu_g09180

Pnu_g09180 (MBD05, MBD5, ATMBD5)


Aliases : MBD05, MBD5, ATMBD5

Description : methylation reader *(MBD5-6) & original description: none


Gene families : OG0000559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000559_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g09180

Target Alias Description ECC score Gene Family Method Actions
Aev_g08757 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g02034 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15671 No alias methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07123 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0028.g024028 ATMBD6, MBD6 methylation reader *(MBD5-6) & original description: CDS=264-1880 0.03 OrthoFinder output from all 47 species
Azfi_s0034.g025360 No alias not classified & original description: CDS=385-1620 0.03 OrthoFinder output from all 47 species
Azfi_s0158.g053875 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: CDS=259-3537 0.03 OrthoFinder output from all 47 species
Cba_g17356 ATMBD6, MBD6 methylation reader *(MBD5-6) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g45091 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G019600.1 ATMBD6, MBD6,... not classified & original description: pacid=50637929... 0.04 OrthoFinder output from all 47 species
Dde_g20923 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01024954001 MBD05, MBD5, ATMBD5 Methyl-CpG-binding domain-containing protein 6... 0.02 OrthoFinder output from all 47 species
Msp_g13225 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26548 No alias methylation reader *(MBD5-6) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g18250 No alias methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR001739 Methyl_CpG_DNA-bd 249 297
No external refs found!