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  5. Pnu_g09428

Pnu_g09428


Description : acid phosphatase storage protein & original description: none


Gene families : OG0000371 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000371_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g09428
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AT5G24770 VSP2, ATVSP2 vegetative storage protein 2 0.03 OrthoFinder output from all 47 species
AT5G24780 ATVSP1, VSP1 vegetative storage protein 1 0.06 OrthoFinder output from all 47 species
Als_g21389 No alias acid phosphatase storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05578 No alias acid phosphatase storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g09736 No alias acid phosphatase storage protein & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016957001 No alias Stem 28 kDa glycoprotein OS=Glycine max 0.03 OrthoFinder output from all 47 species
GSVIVT01029880001 No alias Acid phosphatase 1 OS=Solanum lycopersicum 0.02 OrthoFinder output from all 47 species
Gb_28927 No alias Acid phosphatase 1 OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
LOC_Os03g21480.1 LOC_Os03g21480 Acid phosphatase 1 OS=Solanum lycopersicum... 0.02 OrthoFinder output from all 47 species
LOC_Os05g09740.1 LOC_Os05g09740 Acid phosphatase 1 OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
LOC_Os05g10210.1 LOC_Os05g10210 Acid phosphatase 1 OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
LOC_Os07g27580.1 LOC_Os07g27580 Stem 28 kDa glycoprotein OS=Glycine max... 0.03 OrthoFinder output from all 47 species
Len_g47277 No alias acid phosphatase storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Mp4g08980.1 No alias Acid phosphatase 1 OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Msp_g30849 No alias acid phosphatase storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g14752 No alias acid phosphatase storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013210 No alias acid phosphatase storage protein & original description:... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0102.g019920 No alias acid phosphatase storage protein & original description:... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR005519 Acid_phosphat_B-like 2 140
No external refs found!