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  5. Pnu_g09579

Pnu_g09579


Description : component *(NSP2) of NSP1-NSP2 nodulation initiation complex & original description: none


Gene families : OG0002153 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002153_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g09579
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00099410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRAS... 0.05 OrthoFinder output from all 47 species
AMTR_s00156p00061400 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.05 OrthoFinder output from all 47 species
Adi_g068840 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g080255 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.03 OrthoFinder output from all 47 species
Aev_g19082 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.04 OrthoFinder output from all 47 species
Ala_g11867 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.02 OrthoFinder output from all 47 species
Ala_g14652 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.04 OrthoFinder output from all 47 species
Aob_g09046 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.04 OrthoFinder output from all 47 species
Len_g30763 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.05 OrthoFinder output from all 47 species
Nbi_g10445 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.04 OrthoFinder output from all 47 species
Nbi_g12779 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.05 OrthoFinder output from all 47 species
Ore_g09457 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.03 OrthoFinder output from all 47 species
Ore_g12299 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g28747 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.04 OrthoFinder output from all 47 species
Ore_g28748 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.04 OrthoFinder output from all 47 species
Ore_g30474 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.02 OrthoFinder output from all 47 species
Pnu_g24950 No alias component *(NSP2) of NSP1-NSP2 nodulation initiation... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 446 814
No external refs found!