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  5. Pnu_g09595

Pnu_g09595


Description : not classified & original description: none


Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g09595
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00267180 BCS1,... AAA-ATPase At3g28540 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00019p00244830 AATP1,... AAA-ATPase At3g50940 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00024p00191310 evm_27.TU.AmTr_v1... AAA-ATPase At4g30250 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00036p00176790 BCS1,... Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT2G18193 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 OrthoFinder output from all 47 species
AT3G28600 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 OrthoFinder output from all 47 species
AT5G17760 No alias P-loop containing nucleoside triphosphate hydrolases... 0.05 OrthoFinder output from all 47 species
AT5G40000 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 OrthoFinder output from all 47 species
Adi_g031480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g054957 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g088333 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g08283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g28309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g28310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38293 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06267 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g13091 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g52993 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g29709 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06181 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10195 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12588 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g55732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06431.t1 Aspi01Gene06431 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.19G070900.1 Ceric.19G070900 not classified & original description: pacid=50575977... 0.03 OrthoFinder output from all 47 species
Ceric.19G071000.1 Ceric.19G071000 not classified & original description: pacid=50575763... 0.03 OrthoFinder output from all 47 species
Ceric.19G071100.1 Ceric.19G071100 not classified & original description: pacid=50575396... 0.03 OrthoFinder output from all 47 species
Ceric.19G071900.1 Ceric.19G071900 not classified & original description: pacid=50575289... 0.02 OrthoFinder output from all 47 species
Dcu_g06996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g42407 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03684 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10044 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g11177 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008088001 No alias AAA-ATPase At3g28540 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01018890001 BCS1 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01023336001 No alias AAA-ATPase At3g28600 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01027397001 No alias AAA-ATPase At2g46620 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01032552001 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01032553001 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01032554001 AATP1 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01032558001 AATP1 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_27546 AATP1 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_34238 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_34239 No alias AAA-ATPase At4g25835 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os01g19260.1 AATP1, LOC_Os01g19260 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g45450.1 LOC_Os01g45450 AAA-ATPase At5g17740 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os03g02330.1 LOC_Os03g02330 AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os03g58790.1 LOC_Os03g58790 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os03g58800.1 AATP1, LOC_Os03g58800 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os07g09420.1 LOC_Os07g09420 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os09g27340.1 LOC_Os09g27340 AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os10g37500.1 LOC_Os10g37500 AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os12g28137.1 AATP1, LOC_Os12g28137 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os12g28177.1 AATP1, LOC_Os12g28177 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os12g28550.1 LOC_Os12g28550 AAA-ATPase At5g40000 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
LOC_Os12g44190.1 AATP1, LOC_Os12g44190 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os12g44210.1 AATP1, LOC_Os12g44210 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g10717 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g10718 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g13406 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10285593g0010 AATP1 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10435468g0010 No alias AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_10435468g0020 No alias AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_344969g0010 No alias AAA-ATPase At4g25835 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_56516g0010 No alias AAA-ATPase At3g28570, mitochondrial OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_7834209g0010 No alias AAA-ATPase At3g28600 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp7g18570.1 No alias AAA-ATPase At4g25835 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Msp_g10792 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g03672 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g28405 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g63892 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo407065 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc02g062550.3.1 BCS1, Solyc02g062550 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g30426 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13421 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003358_P001 AATP1, Zm00001e003358 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e004348_P001 Zm00001e004348 AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e012527_P001 Zm00001e012527 AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e027961_P001 Zm00001e027961 AAA-ATPase At3g50940 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR025753 AAA_N_dom 26 120
IPR003959 ATPase_AAA_core 229 369
No external refs found!