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  5. Pnu_g09774

Pnu_g09774 (ATSS4, SS4, SSIV)


Aliases : ATSS4, SS4, SSIV

Description : not classified & original description: none


Gene families : OG0000693 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000693_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g09774

Target Alias Description ECC score Gene Family Method Actions
Aob_g02168 ATSS4, SS4, SSIV not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000667 ATSS4, SS4, SSIV not classified & original description: CDS=177-2066 0.03 OrthoFinder output from all 47 species
Mp1g23570.1 ATSS4, SS4, SSIV Probable starch synthase 4, chloroplastic/amyloplastic... 0.02 OrthoFinder output from all 47 species
Msp_g26184 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g13857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0222.g026242 ATSS3, SS3 starch synthase *(SS3) & original description: CDS=271-2166 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0008430 selenium binding IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0050290 sphingomyelin phosphodiesterase D activity IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001296 Glyco_trans_1 473 623
IPR013534 Starch_synth_cat_dom 168 396
No external refs found!