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  5. Pnu_g10320

Pnu_g10320 (GR-RBP3)


Aliases : GR-RBP3

Description : not classified & original description: none


Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g10320
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
Als_g61147 GR-RBP4, GRP4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011258 CCR2, ATGRP7,... not classified & original description: CDS=99-740 0.03 OrthoFinder output from all 47 species
Azfi_s0136.g050935 GRP2, ATGRP2, GR-RBP2 not classified & original description: CDS=1-543 0.03 OrthoFinder output from all 47 species
Azfi_s0468.g072856 GR-RBP4, GRP4 not classified & original description: CDS=1-582 0.03 OrthoFinder output from all 47 species
Cba_g06390 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45667 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g17060.1 LOC_Os03g17060 Organelle RRM domain-containing protein 2, mitochondrial... 0.02 OrthoFinder output from all 47 species
Lfl_g32878 No alias RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g01621 No alias RNA chaperone *(RZ1) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g29443 GR-RBP3 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g32203 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23738 No alias RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15799 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g07983 GR-RBP4, GRP4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g05599 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g00802 No alias RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17920 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g071560.4.1 Solyc03g071560 RNA chaperone (RZ1|GR-RBP) 0.02 OrthoFinder output from all 47 species
Solyc10g047130.2.1 ATRZ-1A, Solyc10g047130 RNA chaperone (RZ1|GR-RBP) 0.03 OrthoFinder output from all 47 species
Zm00001e011440_P001 Zm00001e011440 RNA chaperone (RZ1|GR-RBP) 0.02 OrthoFinder output from all 47 species
Zm00001e028502_P003 Zm00001e028502 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e033010_P001 Zm00001e033010 RNA chaperone (RZ1|GR-RBP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
MF GO:0008716 D-alanine-D-alanine ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0019627 urea metabolic process IEP HCCA
CC GO:0035550 urease complex IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043419 urea catabolic process IEP HCCA
BP GO:0043605 amide catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071941 nitrogen cycle metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 47 117
No external refs found!