Als_g00144 (SPT)


Aliases : SPT

Description : bHLH-type transcription factor & original description: none


Gene families : OG0003263 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003263_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g00144

Target Alias Description ECC score Gene Family Method Actions
Aob_g23797 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene26956.t1 SPT, Aspi01Gene26956 bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.04G024400.1 Ceric.04G024400 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.22G070000.1 Ceric.22G070000 bHLH-type transcription factor & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.36G013600.1 Ceric.36G013600 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.36G013700.1 Ceric.36G013700 not classified & original description: pacid=50568692... 0.04 OrthoFinder output from all 47 species
Dde_g02574 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g59647 No alias bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g03733 RSL4 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05606 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g48862 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g62948 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39504 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g47042 No alias bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!