1. Home
  2. Species
  3. Psilotum nudum
  4. Sequence
  5. Pnu_g10333

Pnu_g10333


Description : subgroup ERF-II transcription factor *(ERF16/17/18) & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g10333
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00249140 evm_27.TU.AmTr_v1... Cell wall.cutin and suberin.biosynthesis... 0.03 OrthoFinder output from all 47 species
AMTR_s00069p00140780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00148p00084540 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AT1G44830 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G77200 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G44840 ATERF13, ERF13, EREBP ethylene-responsive element binding factor 13 0.02 OrthoFinder output from all 47 species
AT3G14230 RAP2.2 related to AP2 2 0.03 OrthoFinder output from all 47 species
AT4G13620 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g053440 ATERF4, RAP2.5,... subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Adi_g081431 RAP2.6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g02425 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g07933 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Aev_g09757 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g21810 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.03 OrthoFinder output from all 47 species
Aev_g39323 CRF4 subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g42330 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14106 DEAR2 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Als_g10396 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Als_g14120 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g21812 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26687 No alias subgroup ERF-I transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g31880 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g32672 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g37025 DEAR3 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
Als_g61751 RAP2.1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03086 ATERF8, ATERF-8, ERF8 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aob_g04287 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Aop_g18696 ERF110 subgroup ERF-X transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34453.t1 Aspi01Gene34453 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67758.t1 TINY2, Aspi01Gene67758 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g28947 RAP2.11 transcription factor *(ERN1) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G096400.1 ERF-1, ATERF-1,... subgroup ERF-IX transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.15G043600.1 HRE2, Ceric.15G043600 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Ceric.19G006100.1 HRE2, Ceric.19G006100 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Ceric.33G045200.1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g26333 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03905 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g05268 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.05 OrthoFinder output from all 47 species
Dcu_g05508 No alias subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15103 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g24404 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ehy_g00819 ERF1, ATERF1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g43820.1 ERF5, ATERF-5,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os03g08470.1 RAP2.12, LOC_Os03g08470 Ethylene-responsive transcription factor 1 OS=Oryza... 0.02 OrthoFinder output from all 47 species
LOC_Os04g46220.1 ERF-1, ATERF-1,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os05g41760.1 ATERF12, ERF12,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Len_g14523 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06554 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.02 OrthoFinder output from all 47 species
MA_10431706g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_137148g0010 ATERF4, RAP2.5,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_18403g0020 No alias Ethylene-responsive transcription factor RAP2-4... 0.02 OrthoFinder output from all 47 species
MA_184464g0010 ERF-1, ATERF-1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_18454g0020 ATERF3, ERF3 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
MA_420358g0010 ERF-1, ATERF-1 Ethylene-responsive transcription factor 1A... 0.03 OrthoFinder output from all 47 species
MA_502153g0010 ATERF-9, ERF9, ATERF9 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_81029g0010 ATERF4, RAP2.5,... transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
MA_8984558g0010 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
MA_9304g0020 ATERF-9, ERF9, ATERF9 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
MA_937270g0010 ERF2, ATERF2, ATERF-2 Ethylene-responsive transcription factor 1A... 0.03 OrthoFinder output from all 47 species
Mp4g00380.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g03524 ORA47 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15421 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g20460 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32583 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g41367 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44016 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g44017 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g26637 tny not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006108 No alias not classified & original description: CDS=1-567 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014770 No alias subgroup ERF-V transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0119.g021258 CRF5 subgroup ERF-VI transcription factor & original... 0.02 OrthoFinder output from all 47 species
Smo80895 ERF2, ATERF2, ATERF-2 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
Solyc01g057080.1.1 Solyc01g057080 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc03g117230.1.1 Solyc03g117230 Ethylene-responsive transcription factor ERF084... 0.02 OrthoFinder output from all 47 species
Solyc03g124110.2.1 DREB1A, ATCBF3,... transcription factor (DREB). transcription factor (CBF/DREB1) 0.02 OrthoFinder output from all 47 species
Solyc06g035700.1.1 Solyc06g035700 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc09g089910.1.1 Solyc09g089910 transcription factor (ERF). transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Solyc11g042560.1.1 Solyc11g042560 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc12g009490.3.1 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.02 OrthoFinder output from all 47 species
Spa_g14734 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56350 No alias subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Zm00001e006692_P001 Zm00001e006692 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e013685_P001 ATERF4, RAP2.5,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e022864_P001 ESR1, DRN, Zm00001e022864 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e023159_P001 Zm00001e023159 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Zm00001e023686_P001 Zm00001e023686 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e030279_P001 ATERF3, ERF3,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e032032_P001 ATERF12, ERF12,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e034661_P001 ERF110, Zm00001e034661 Ethylene-responsive transcription factor ERF115... 0.02 OrthoFinder output from all 47 species
Zm00001e037404_P001 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
MF GO:0015926 glucosidase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0051118 glucan endo-1,3-alpha-glucosidase activity IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 20 70
No external refs found!