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  5. Als_g01805

Als_g01805


Description : not classified & original description: none


Gene families : OG0000408 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000408_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g01805
Cluster HCCA: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
Adi_g000642 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g093697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38287 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g40196 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30879 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22756 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g76491 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G051000.1 Ceric.02G051000 not classified & original description: pacid=50584270... 0.07 OrthoFinder output from all 47 species
Ceric.12G077500.1 Ceric.12G077500 not classified & original description: pacid=50602414... 0.03 OrthoFinder output from all 47 species
Ceric.13G045400.1 Ceric.13G045400 not classified & original description: pacid=50635341... 0.05 OrthoFinder output from all 47 species
Ceric.14G011900.1 Ceric.14G011900 not classified & original description: pacid=50633209... 0.05 OrthoFinder output from all 47 species
Ceric.21G073700.1 Ceric.21G073700 not classified & original description: pacid=50602879... 0.03 OrthoFinder output from all 47 species
Ceric.33G010700.1 Ceric.33G010700 not classified & original description: pacid=50607144... 0.03 OrthoFinder output from all 47 species
Ceric.37G053100.1 Ceric.37G053100 not classified & original description: pacid=50616496... 0.03 OrthoFinder output from all 47 species
Dac_g03599 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g10167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20909 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g11784 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g17028 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19451 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g41343 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g50446 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g25122 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30908 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37983 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g02464 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g15822 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g63797 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 33 48
No external refs found!