1. Home
  2. Species
  3. Psilotum nudum
  4. Sequence
  5. Pnu_g10528

Pnu_g10528 (CRF4)


Aliases : CRF4

Description : subgroup ERF-VI transcription factor & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g10528

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00107p00095070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AT1G68550 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G25820 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G47220 ERF2, ATERF2, ATERF-2 ethylene responsive element binding factor 2 0.03 OrthoFinder output from all 47 species
Adi_g009324 ATERF12, ERF12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035511 ERF110 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079001 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g27720 No alias subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g42816 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0070.g036745 ATERF-9, ERF9, ATERF9 not classified & original description: CDS=1-3831 0.02 OrthoFinder output from all 47 species
Ceric.36G047400.1 Ceric.36G047400 not classified & original description: pacid=50568585... 0.02 OrthoFinder output from all 47 species
Dcu_g08328 LEP not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g15881 PUCHI subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g17593 CRF3 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00325 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g11677 No alias subgroup ERF-V transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g51670.1 RAP2.4, LOC_Os02g51670 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os02g52670.1 ERF110, LOC_Os02g52670 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g64260.1 ERF1, ATERF1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os05g29810.1 ERF72, EBP,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os08g36920.1 RRTF1, LOC_Os08g36920 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Len_g20241 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Lfl_g25640 No alias subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Mp1g20040.1 ATERF4, RAP2.5,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Msp_g14031 ATERF4, RAP2.5,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g27431 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Ore_g02257 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g06505 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.04 OrthoFinder output from all 47 species
Pir_g09597 CRF4 subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g21797 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g28144 DDF1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g29161 ERF104 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g37433 ATERF13, ERF13, EREBP subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g16792 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Pnu_g22604 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011388 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0130.g022062 No alias subgroup ERF-VI transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc05g052030.1.1 Solyc05g052030 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc12g049560.2.1 RAP2.2, Solyc12g049560 transcription factor (ERF) 0.05 OrthoFinder output from all 47 species
Spa_g06007 CRF3 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g00486 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Tin_g11043 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Zm00001e010860_P001 HRE2, Zm00001e010860 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 203 253
No external refs found!