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  5. Als_g02259

Als_g02259


Description : RING-H2-class ATL-subclass E3 ubiquitin ligase & original description: none


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g02259

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00032810 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AT4G17245 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G40070 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g023521 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aev_g16138 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aop_g03042 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01421.t1 Aspi01Gene01421 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37205.t2 Aspi01Gene37205 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Cba_g75914 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ceric.07G057800.1 ATL6, Ceric.07G057800 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.22G062000.1 Ceric.22G062000 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.33G012100.1 Ceric.33G012100 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.06 OrthoFinder output from all 47 species
Ceric.39G005300.1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g22611 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ehy_g30250 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01015682001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Gb_05811 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Gb_26582 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os01g55110.1 LOC_Os01g55110 RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species
LOC_Os04g49170.1 LOC_Os04g49170 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g12680.1 LOC_Os06g12680 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Len_g53832 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Lfl_g39367 RHA3B not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g00957 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00299 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Nbi_g05230 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Nbi_g08032 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ore_g00818 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g07714 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pnu_g32058 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Solyc02g087040.1.1 Solyc02g087040 RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species
Solyc05g008640.1.1 RHA2A, Solyc05g008640 RHA2 signal transducer of abscisic acid perception 0.03 OrthoFinder output from all 47 species
Solyc06g051250.1.1 Solyc06g051250 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc11g005290.1.1 Solyc11g005290 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Spa_g02165 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Spa_g20845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29391 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e008560_P001 RHA2A, Zm00001e008560 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e015905_P001 ATL31, CNI1,... RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e023515_P001 Zm00001e023515 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e029032_P001 Zm00001e029032 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e030750_P001 Zm00001e030750 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 107 150
No external refs found!