Als_g02543


Description : ROP-activating protein *(RopGAP) & original description: none


Gene families : OG0000915 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000915_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g02543

Target Alias Description ECC score Gene Family Method Actions
LOC_Os07g22580.1 LOC_Os07g22580 ROP-activating protein (RopGAP) 0.04 OrthoFinder output from all 47 species
LOC_Os12g34840.1 LOC_Os12g34840 ROP-activating protein (RopGAP) 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006099 No alias ROP-activating protein *(RopGAP) & original description:... 0.03 OrthoFinder output from all 47 species
Solyc09g074340.3.1 Solyc09g074340 ROP-activating protein (RopGAP) 0.03 OrthoFinder output from all 47 species
Zm00001e018302_P003 Zm00001e018302 ROP-activating protein (RopGAP) 0.03 OrthoFinder output from all 47 species
Zm00001e033341_P001 Zm00001e033341 ROP-activating protein (RopGAP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR000198 RhoGAP_dom 191 325
IPR000095 CRIB_dom 128 155
No external refs found!