Aliases : COL1, ATCOL1
Description : floral promoter *(CONSTANS) & original description: none
Gene families : OG0001141 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001141_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00111p00022140 | ATCOL5, COL5,... | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g10222 | ATCOL5, COL5 | floral promoter *(CONSTANS) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g03545 | COL3, ATCOL3 | floral promoter *(CONSTANS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g11774 | COL3, ATCOL3 | floral promoter *(CONSTANS) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g22951 | ATCOL4, COL4 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01029107001 | ATCOL5, COL5 | Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Gb_41704 | ATCOL4, COL4 | transcription factor (BBX-CO) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g16370.1 | COL2, ATCOL2,... | transcription factor (BBX-CO) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os06g44450.1 | ATCOL5, COL5,... | Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os09g06464.1 | COL2, ATCOL2,... | Zinc finger protein CO3 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g41100.1 | ATCOL5, COL5,... | Transcription factor GHD7 OS=Oryza sativa subsp.... | 0.02 | OrthoFinder output from all 47 species | |
| Mp8g13470.1 | ATCOL4, COL4 | transcription factor (BBX-CO) | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g09426 | ATCOL5, COL5 | floral promoter *(CONSTANS) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g34612 | ATCOL4, COL4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g01588 | ATCOL4, COL4 | floral promoter *(CONSTANS) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g14700 | COL1, ATCOL1 | floral promoter *(CONSTANS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0006.g002977 | ATCOL4, COL4 | floral promoter *(CONSTANS) & original description: CDS=1-1206 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0011.g005340 | ATCOL4, COL4 | floral promoter *(CONSTANS) & original description: CDS=210-1442 | 0.05 | OrthoFinder output from all 47 species | |
| Solyc02g089520.2.1 | COL2, ATCOL2,... | transcription factor (BBX-CO) | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g44555 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e013804_P001 | ATCOL5, COL5,... | Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e021565_P001 | ATCOL4, COL4,... | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e037706_P002 | ATCOL5, COL5,... | Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e039922_P001 | COL3, ATCOL3,... | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004601 | peroxidase activity | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006979 | response to oxidative stress | IEP | HCCA |
| MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0016209 | antioxidant activity | IEP | HCCA |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | HCCA |
| MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
| MF | GO:0030247 | polysaccharide binding | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:2001070 | starch binding | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| No external refs found! |
