Als_g03187 (EIF3B-2, ATEIF3B-2, EIF3B)


Aliases : EIF3B-2, ATEIF3B-2, EIF3B

Description : component *(eIF3b) of eIF3 mRNA-to-PIC binding complex & original description: none


Gene families : OG0004558 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004558_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g03187

Target Alias Description ECC score Gene Family Method Actions
Aop_g13421 EIF3B-2, ATEIF3B-2, EIF3B component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020848.60 EIF3B-2, ATEIF3B-2, EIF3B Protein biosynthesis.translation... 0.01 OrthoFinder output from all 47 species
LOC_Os10g41960.1 ATTIF3B1,... component eIF3b of eIF3 mRNA-to-PIC binding complex 0.03 OrthoFinder output from all 47 species
Sam_g10595 No alias component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Sam_g35266 No alias component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Tin_g05601 EIF3B-2, ATEIF3B-2, EIF3B component *(eIF3b) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013979 TIF_beta_prop-like 415 615
IPR000504 RRM_dom 90 145
No external refs found!