1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g03295

Als_g03295 (GRP2B, ATGRP2B, ATCSP4)


Aliases : GRP2B, ATGRP2B, ATCSP4

Description : cold-responsive mRNA chaperone *(CSD) & original description: none


Gene families : OG0001037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001037_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g03295

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00206510 GRP2B, ATGRP2B,... External stimuli response.temperature.Csd... 0.03 OrthoFinder output from all 47 species
AMTR_s00041p00167350 No alias External stimuli response.temperature.Csd... 0.03 OrthoFinder output from all 47 species
AT2G17870 ATCSP3, CSP3 cold shock domain protein 3 0.06 OrthoFinder output from all 47 species
Adi_g042846 ATCSP2, GRP2, CSDP2, CSP2 cold-responsive mRNA chaperone *(CSD) & original... 0.03 OrthoFinder output from all 47 species
Ceric.30G075000.1 ATCSP2, GRP2,... cold-responsive mRNA chaperone *(CSD) & original... 0.04 OrthoFinder output from all 47 species
Dde_g01349 ATCSP2, GRP2, CSDP2, CSP2 cold-responsive mRNA chaperone *(CSD) & original... 0.03 OrthoFinder output from all 47 species
Gb_15589 ATCSP2, GRP2, CSDP2, CSP2 RNA chaperone (CSP). mRNA chaperone (CSD) 0.03 OrthoFinder output from all 47 species
Lfl_g23689 GRP2B, ATGRP2B, ATCSP4 cold-responsive mRNA chaperone *(CSD) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g05853 ATCSP2, GRP2, CSDP2, CSP2 cold-responsive mRNA chaperone *(CSD) & original... 0.02 OrthoFinder output from all 47 species
Pp3c5_7920V3.1 GRP2B, ATGRP2B,... cold shock domain protein 1 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g003991 GRP2B, ATGRP2B, ATCSP4 cold-responsive mRNA chaperone *(CSD) & original... 0.03 OrthoFinder output from all 47 species
Sam_g45087 No alias cold-responsive mRNA chaperone *(CSD) & original... 0.03 OrthoFinder output from all 47 species
Solyc02g083800.4.1 ATCSP3, CSP3,... RNA chaperone (CSP). mRNA chaperone (CSD) 0.03 OrthoFinder output from all 47 species
Solyc03g033500.4.1 ATCSP3, CSP3,... RNA chaperone (CSP). mRNA chaperone (CSD) 0.03 OrthoFinder output from all 47 species
Spa_g00238 ATCSP2, GRP2, CSDP2, CSP2 cold-responsive mRNA chaperone *(CSD) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002059 CSP_DNA-bd 57 120
No external refs found!