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  5. Pnu_g10680

Pnu_g10680


Description : not classified & original description: none


Gene families : OG0007862 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007862_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g10680
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
AT4G28740 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.03 OrthoFinder output from all 47 species
Adi_g007087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g02215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11403 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g07202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.32G001900.1 Ceric.32G001900 not classified & original description: pacid=50598721... 0.05 OrthoFinder output from all 47 species
Cre06.g266900 No alias Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.02 OrthoFinder output from all 47 species
Dac_g07193 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g09067 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g11518 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16984 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01028479001 No alias Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.02 OrthoFinder output from all 47 species
LOC_Os04g42800.1 LOC_Os04g42800 Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.07 OrthoFinder output from all 47 species
Len_g09241 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Mp7g15330.1 No alias Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.02 OrthoFinder output from all 47 species
Pir_g19021 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013941 No alias not classified & original description: CDS=1-1122 0.05 OrthoFinder output from all 47 species
Solyc09g063140.4.1 Solyc09g063140 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g22705 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g00565 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR021883 LPA1-like 99 174
No external refs found!