1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g03741

Als_g03741


Description : not classified & original description: none


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g03741
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AT5G64920 CIP8 COP1-interacting protein 8 0.02 OrthoFinder output from all 47 species
Adi_g008105 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g017488 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Adi_g088761 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g14605 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G095600.1 Ceric.07G095600 not classified & original description: pacid=50626992... 0.04 OrthoFinder output from all 47 species
Ceric.14G002100.1 Ceric.14G002100 not classified & original description: pacid=50633322... 0.04 OrthoFinder output from all 47 species
Ceric.14G083100.1 Ceric.14G083100 not classified & original description: pacid=50633279... 0.03 OrthoFinder output from all 47 species
Dcu_g32754 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16758 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Ehy_g01134 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
GSVIVT01025505001 ATCRT1 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
LOC_Os03g20870.1 LOC_Os03g20870 E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Lfl_g10572 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11310 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g28304 RHC1A RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ore_g03872 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g00999 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17099 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14658 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Spa_g14660 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Spa_g20368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011788_P002 Zm00001e011788 E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Zm00001e016135_P001 Zm00001e016135 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e028905_P001 RHC1A, Zm00001e028905 Probable E3 ubiquitin-protein ligase RHC1A... 0.02 OrthoFinder output from all 47 species
Zm00001e036731_P001 Zm00001e036731 E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030151 molybdenum ion binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR039525 RNF126-like_zinc-ribbon 8 39
IPR001841 Znf_RING 230 273
No external refs found!