Als_g04279


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g04279
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00267110 OSB1,... Cell cycle.organelle machineries.DNA... 0.03 OrthoFinder output from all 47 species
AMTR_s00057p00137550 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g36980,... 0.03 OrthoFinder output from all 47 species
AT1G18485 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G57430 OTP84 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g38515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09082 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g10403 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g12484 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17265 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g17504 OTP81 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g25838 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g31145 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g31168 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g34486 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g35743 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g37463 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03860 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18943 CRR21 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g19094 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g62062 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g06037 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g21675 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37596 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g03409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07680 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14919 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g15962 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20825 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g30013 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g75230 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75325 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G048900.1 Ceric.04G048900 ssDNA-binding protein *(OSB) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.15G056400.1 Ceric.15G056400 not classified & original description: pacid=50639467... 0.06 OrthoFinder output from all 47 species
Ceric.29G024800.1 Ceric.29G024800 not classified & original description: pacid=50625545... 0.05 OrthoFinder output from all 47 species
Dac_g32322 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g03977 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g11227 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18082 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22598 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g30664 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g44210.2 LOC_Os03g44210 RNA editing factor (SEL1/PDM1) 0.05 OrthoFinder output from all 47 species
LOC_Os04g51350.1 LOC_Os04g51350 RNA editing factor (AEF1) 0.04 OrthoFinder output from all 47 species
LOC_Os05g49920.1 VAC1, ECB2,... RNA editing factor (ECB2/VAC1) 0.02 OrthoFinder output from all 47 species
Len_g03874 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g05368 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g12903 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40816 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10426569g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
MA_653417g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
Msp_g03801 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g11341 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g23050 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34007 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41127 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g27965 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g39306 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g12540 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g13547 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14712 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27764 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29898 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g34612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51209 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo107480 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Spa_g50449 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g54647 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g04591 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08973 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10922 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g35237 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g44639 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e002552_P001 Zm00001e002552 RNA editing factor (SEL1/PDM1) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 388 434
IPR002885 Pentatricopeptide_repeat 185 232
IPR002885 Pentatricopeptide_repeat 84 133
IPR002885 Pentatricopeptide_repeat 287 334
No external refs found!