Pnu_g10754 (TOR2, TUA4)

Aliases : TOR2, TUA4

Description : alpha-Tubulin component *(TUA) of alpha-beta-Tubulin heterodimer & original description: none

Gene families : OG0000233 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000233_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pnu_g10754
Cluster	HCCA: Cluster_103

Target	Alias	Description	ECC score	Gene Family Method
Adi_g017319	TOR2, TUA4	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Adi_g017320	TOR2, TUA4	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Adi_g102765	TUA6	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Ala_g16980	TOR2, TUA4	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Als_g57469	TOR2, TUA4	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Aob_g07816	TUA3	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Aspi01Gene04513.t2	TOR2, TUA4,...	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Azfi_s0243.g059892	TOR2, TUA4	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Cba_g07542	TOR2, TUA4	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Cba_g10650	TOR2, TUA4	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Cba_g15078	TOR2, TUA4	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Ceric.12G037900.1	TUA3, Ceric.12G037900	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Ceric.21G070800.1	TOR2, TUA4,...	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Ceric.24G052000.1	TOR2, TUA4,...	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
GSVIVT01033415001	TUA3	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
LOC_Os03g11970.1	TUA3, LOC_Os03g11970	component alpha-Tubulin of alpha-beta-Tubulin heterodimer	0.02	OrthoFinder output from all 47 species
LOC_Os07g38730.1	TUA3, LOC_Os07g38730	component alpha-Tubulin of alpha-beta-Tubulin heterodimer	0.03	OrthoFinder output from all 47 species
Lfl_g23977	TOR2, TUA4	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Mp4g00550.1	TUA3	component alpha-Tubulin of alpha-beta-Tubulin heterodimer	0.02	OrthoFinder output from all 47 species
Nbi_g21214	TUA6	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Pir_g13448	TUA3	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Pp3c25_990V3.1	TUA3, Pp3c25_990	tubulin alpha-5	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0122.g021435	TUA3	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Sam_g09431	No alias	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Smo236787	TOR2, TUA4	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Spa_g26077	TUA6	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Tin_g05873	TUA6	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	IEP	HCCA
CC	GO:0000152	nuclear ubiquitin ligase complex	IEP	HCCA
CC	GO:0005680	anaphase-promoting complex	IEP	HCCA
BP	GO:0007088	regulation of mitotic nuclear division	IEP	HCCA
BP	GO:0007346	regulation of mitotic cell cycle	IEP	HCCA
MF	GO:0008198	ferrous iron binding	IEP	HCCA
BP	GO:0009966	regulation of signal transduction	IEP	HCCA
BP	GO:0010564	regulation of cell cycle process	IEP	HCCA
BP	GO:0010646	regulation of cell communication	IEP	HCCA
BP	GO:0010965	regulation of mitotic sister chromatid separation	IEP	HCCA
BP	GO:0023051	regulation of signaling	IEP	HCCA
BP	GO:0030071	regulation of mitotic metaphase/anaphase transition	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
CC	GO:0031461	cullin-RING ubiquitin ligase complex	IEP	HCCA
BP	GO:0033043	regulation of organelle organization	IEP	HCCA
BP	GO:0033044	regulation of chromosome organization	IEP	HCCA
BP	GO:0033045	regulation of sister chromatid segregation	IEP	HCCA
BP	GO:0033047	regulation of mitotic sister chromatid segregation	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
BP	GO:0048583	regulation of response to stimulus	IEP	HCCA
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	HCCA
BP	GO:0051128	regulation of cellular component organization	IEP	HCCA
BP	GO:0051726	regulation of cell cycle	IEP	HCCA
BP	GO:0051783	regulation of nuclear division	IEP	HCCA
BP	GO:0051983	regulation of chromosome segregation	IEP	HCCA
MF	GO:0071949	FAD binding	IEP	HCCA
BP	GO:0090231	regulation of spindle checkpoint	IEP	HCCA
BP	GO:0090266	regulation of mitotic cell cycle spindle assembly checkpoint	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
BP	GO:1901976	regulation of cell cycle checkpoint	IEP	HCCA
BP	GO:1901987	regulation of cell cycle phase transition	IEP	HCCA
BP	GO:1901990	regulation of mitotic cell cycle phase transition	IEP	HCCA
BP	GO:1902099	regulation of metaphase/anaphase transition of cell cycle	IEP	HCCA
BP	GO:1902531	regulation of intracellular signal transduction	IEP	HCCA
BP	GO:1903504	regulation of mitotic spindle checkpoint	IEP	HCCA
BP	GO:1905818	regulation of chromosome separation	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR018316	Tubulin/FtsZ_2-layer-sand-dom	351	480
IPR003008	Tubulin_FtsZ_GTPase	91	301

External Links

No external refs found!

Pnu_g10754 (TOR2, TUA4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation