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  5. Als_g04972

Als_g04972


Description : not classified & original description: none


Gene families : OG0000221 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000221_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g04972

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00251380 evm_27.TU.AmTr_v1... Protein BPS1, chloroplastic OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00040p00052950 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G01550 BPS1 Protein of unknown function (DUF793) 0.07 OrthoFinder output from all 47 species
AT1G18740 No alias Protein of unknown function (DUF793) 0.05 OrthoFinder output from all 47 species
AT1G74450 No alias Protein of unknown function (DUF793) 0.05 OrthoFinder output from all 47 species
Adi_g009779 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g022669 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g024256 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g075560 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g03912 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01817 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g09153 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10598 BPS1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24209 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Als_g01778 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g50790 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54448 BPS1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g01622 BPS1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g27370 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene17514.t1 Aspi01Gene17514 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene58350.t1 Aspi01Gene58350 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene58701.t1 Aspi01Gene58701 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g02551 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15700 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G039400.1 Ceric.04G039400 not classified & original description: pacid=50630851... 0.07 OrthoFinder output from all 47 species
Ceric.22G029200.1 Ceric.22G029200 not classified & original description: pacid=50614228... 0.02 OrthoFinder output from all 47 species
Ceric.22G030100.1 BPS1, Ceric.22G030100 not classified & original description: pacid=50615453... 0.03 OrthoFinder output from all 47 species
Ceric.22G031900.1 BPS1, Ceric.22G031900 not classified & original description: pacid=50615144... 0.02 OrthoFinder output from all 47 species
Ceric.22G032000.1 Ceric.22G032000 not classified & original description: pacid=50615093... 0.02 OrthoFinder output from all 47 species
Ceric.22G032100.1 Ceric.22G032100 not classified & original description: pacid=50614987... 0.03 OrthoFinder output from all 47 species
Ceric.22G032200.1 BPS1, Ceric.22G032200 not classified & original description: pacid=50614808... 0.02 OrthoFinder output from all 47 species
Ceric.25G006500.1 Ceric.25G006500 not classified & original description: pacid=50594057... 0.05 OrthoFinder output from all 47 species
Ceric.27G016500.1 Ceric.27G016500 not classified & original description: pacid=50605586... 0.06 OrthoFinder output from all 47 species
Ceric.28G062100.1 Ceric.28G062100 not classified & original description: pacid=50570697... 0.03 OrthoFinder output from all 47 species
Ceric.35G009900.1 Ceric.35G009900 not classified & original description: pacid=50581013... 0.07 OrthoFinder output from all 47 species
Dac_g11879 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g13361 BPS1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g22106 BPS1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16221 BPS1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g02279 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06609 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23107 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01019411001 ROH1 No description available 0.05 OrthoFinder output from all 47 species
Gb_06674 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_18309 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_18312 No alias Protein BPS1, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_18313 No alias Protein BPS1, chloroplastic OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_22841 No alias Protein BPS1, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_22842 No alias Protein BPS1, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os02g01930.1 ROH1, LOC_Os02g01930 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os11g06440.1 LOC_Os11g06440 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g06780.1 LOC_Os12g06780 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g11084 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05382 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g25221 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38463 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10108167g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_10430865g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_130577g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Msp_g08592 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g11031 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Msp_g18667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g36211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48226 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g48320 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g01034 BPS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01945 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06670 ROH1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10004 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09883 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g23240 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30449 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g31096 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09452 BPS1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12102 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g09502 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g24841 BPS1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04451 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18358 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0050.g013818 No alias not classified & original description: CDS=1-1071 0.02 OrthoFinder output from all 47 species
Smo422297 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc01g094950.3.1 Solyc01g094950 Protein BPS1, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc01g104660.3.1 Solyc01g104660 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc04g071480.1.1 Solyc04g071480 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g07215 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g09588 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g18331 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g25384 BPS1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g27913 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11641 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g31232 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e024656_P001 Zm00001e024656 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e039447_P001 Zm00001e039447 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008511 ROH1-like 201 353
No external refs found!