Als_g05655 (ATRGTA1, RGTA1)


Aliases : ATRGTA1, RGTA1

Description : EC_2.5 transferase transferring alkyl or aryl group, other than methyl group & original description: none


Gene families : OG0004280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004280_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g05655

Target Alias Description ECC score Gene Family Method Actions
AT4G24490 ATRGTA1, RGTA1 RAB geranylgeranyl transferase alpha subunit 1 0.03 OrthoFinder output from all 47 species
Ceric.01G053200.1 ATRGTA1, RGTA1,... EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Dcu_g03999 ATRGTA1, RGTA1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
GSVIVT01009191001 ATRGTA1, RGTA1 Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from all 47 species
Zm00001e030328_P001 ATRGTA1, RGTA1,... subunit alpha of RAB-GTPase geranylgeranyltransferase... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008318 protein prenyltransferase activity IEA Interproscan
BP GO:0018342 protein prenylation IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0009967 positive regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0010647 positive regulation of cell communication IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0023056 positive regulation of signaling IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0048584 positive regulation of response to stimulus IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0080135 regulation of cellular response to stress IEP HCCA
BP GO:2000638 regulation of SREBP signaling pathway IEP HCCA
BP GO:2000640 positive regulation of SREBP signaling pathway IEP HCCA
InterPro domains Description Start Stop
IPR002088 Prenyl_trans_a 45 74
IPR002088 Prenyl_trans_a 88 117
IPR002088 Prenyl_trans_a 205 234
IPR002088 Prenyl_trans_a 159 188
IPR002088 Prenyl_trans_a 124 150
No external refs found!