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  5. Als_g05666

Als_g05666 (4CL3)


Aliases : 4CL3

Description : EC_6.2 ligase forming carbon-sulfur bond & original description: none


Gene families : OG0000673 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000673_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g05666

Target Alias Description ECC score Gene Family Method Actions
AT1G51680 4CL1, AT4CL1, 4CL.1 4-coumarate:CoA ligase 1 0.04 OrthoFinder output from all 47 species
AT3G21240 AT4CL2, 4CL2 4-coumarate:CoA ligase 2 0.03 OrthoFinder output from all 47 species
Aev_g02337 4CL1, AT4CL1, 4CL.1 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Ala_g19209 AT4CL2, 4CL2 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Aob_g06612 4CL1, AT4CL1, 4CL.1 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Aop_g17905 4CL1, AT4CL1, 4CL.1 EC_6.2 ligase forming carbon-sulfur bond & original... 0.06 OrthoFinder output from all 47 species
Azfi_s0030.g024259 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0114.g046013 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Cba_g41839 4CL1, AT4CL1, 4CL.1 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.04G025900.1 4CL3, Ceric.04G025900 not classified & original description: pacid=50631494... 0.03 OrthoFinder output from all 47 species
Ceric.12G038600.1 4CL3, Ceric.12G038600 EC_6.2 ligase forming carbon-sulfur bond & original... 0.06 OrthoFinder output from all 47 species
Ceric.12G077900.1 4CL3, Ceric.12G077900 not classified & original description: pacid=50601305... 0.03 OrthoFinder output from all 47 species
Ceric.15G048400.1 4CL3, Ceric.15G048400 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.1Z155100.1 4CL3, Ceric.1Z155100 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Dde_g24331 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Dde_g31145 ACOS5 acyl-CoA synthetase *(ACS5) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16269 AT4CL2, 4CL2 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01010497001 ACOS5 Cell wall.sporopollenin.synthesis.ACS5 acyl-CoA synthetase 0.02 OrthoFinder output from all 47 species
GSVIVT01029182001 4CL1, AT4CL1, 4CL.1 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.02 OrthoFinder output from all 47 species
GSVIVT01029183001 AT4CL2, 4CL2 4-coumarate--CoA ligase 1 OS=Nicotiana tabacum 0.04 OrthoFinder output from all 47 species
LOC_Os08g14760.1 4CL1, AT4CL1,... p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.02 OrthoFinder output from all 47 species
Len_g20151 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.06 OrthoFinder output from all 47 species
Lfl_g06579 4CL1, AT4CL1, 4CL.1 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Lfl_g15665 4CL1, AT4CL1, 4CL.1 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006230 4CL3 not classified & original description: CDS=1-975 0.02 OrthoFinder output from all 47 species
Smo115483 ACOS5 Cell wall.sporopollenin.synthesis.ACS5 acyl-CoA synthetase 0.02 OrthoFinder output from all 47 species
Solyc02g088710.3.1 ACOS5, Solyc02g088710 acyl-CoA synthetase (ACS5) 0.02 OrthoFinder output from all 47 species
Spa_g07084 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.05 OrthoFinder output from all 47 species
Tin_g13836 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Zm00001e037698_P001 4CL1, AT4CL1,... p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005199 structural constituent of cell wall IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 64 475
IPR025110 AMP-bd_C 484 559
No external refs found!