Als_g06229 (GLR3.3, ATGLR3.3)

Aliases : GLR3.3, ATGLR3.3

Description : ligand-gated cation channel *(GLR) & original description: none

Gene families : OG0000075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g06229
Cluster	HCCA: Cluster_1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00021p00176450	ATGLR2.9,...	Solute transport.channels.GLR ligand-gated cation channel	0.03	OrthoFinder output from all 47 species
AMTR_s00062p00050250	GLUR3, GLR3.4,...	Solute transport.channels.GLR ligand-gated cation channel	0.04	OrthoFinder output from all 47 species
AT1G42540	GLR3.3, ATGLR3.3	glutamate receptor 3.3	0.04	OrthoFinder output from all 47 species
AT2G29120	GLR2.7, ATGLR2.7	glutamate receptor 2.7	0.04	OrthoFinder output from all 47 species
Ceric.29G011200.1	GLUR3, GLR3.4,...	ligand-gated cation channel *(GLR) & original...	0.05	OrthoFinder output from all 47 species
GSVIVT01021161001	GLR2.7, ATGLR2.7	Solute transport.channels.GLR ligand-gated cation channel	0.04	OrthoFinder output from all 47 species
GSVIVT01033156001	GLR2.8, ATGLR2.8	Solute transport.channels.GLR ligand-gated cation channel	0.05	OrthoFinder output from all 47 species
LOC_Os07g01310.1	GLUR3, GLR3.4,...	ligand-gated cation channel (GLR)	0.02	OrthoFinder output from all 47 species
LOC_Os09g26144.1	GLR2.8,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
MA_10428521g0010	GLR3.3, ATGLR3.3	ligand-gated cation channel (GLR)	0.02	OrthoFinder output from all 47 species
MA_160730g0010	GLR3.3, ATGLR3.3	ligand-gated cation channel (GLR)	0.02	OrthoFinder output from all 47 species
Nbi_g24009	ATGLR2.9, GLR2.9	ligand-gated cation channel *(GLR) & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g26213	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.04	OrthoFinder output from all 47 species
Pp3c15_25650V3.1	GLR3.3,...	glutamate receptor 3.3	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015276	ligand-gated monoatomic ion channel activity	IEA	Interproscan
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022834	ligand-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022839	monoatomic ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008483	transaminase activity	IEP	HCCA
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001638	Solute-binding_3/MltF_N	82	424
IPR001320	Iontro_rcpt_C	425	457

External Links

No external refs found!

Als_g06229 (GLR3.3, ATGLR3.3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation