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  5. Als_g06340

Als_g06340


Description : bHLH-type transcription factor & original description: none


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g06340

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00032460 PIL5, PIF1,... External stimuli response.light.red/far red light.PIF... 0.03 OrthoFinder output from all 47 species
Adi_g021895 CIB1 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Adi_g044914 SPT bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g055289 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g065834 LRL1 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g084441 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g39083 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05647 No alias bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g12122 PIL5, PIF1 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g21524 LRL3 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g54309 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g40845 SPT bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene32584.t1 LRL3, Aspi01Gene32584 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s3754.g116756 CIB1 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Dde_g00863 SPT bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g01707 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g08372 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Gb_06182 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Gb_22201 LRL3 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
LOC_Os03g58330.1 UNE12, LOC_Os03g58330 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os06g16400.1 LOC_Os06g16400 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Len_g22983 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24250 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06200 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g09011 SPT bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g30793 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35112 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g43243 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18447 SPT bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g19172 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g03327 LRL3 bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g09406 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18384 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02210 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05246 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000117 LRL3 bHLH-type transcription factor & original description: CDS=18-674 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0323.g027238 LRL3 bHLH-type transcription factor & original description: CDS=1-1038 0.04 OrthoFinder output from all 47 species
Sam_g40903 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22941 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05846 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g31631 No alias regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Zm00001e016160_P003 SPT, Zm00001e016160 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 444 490
No external refs found!