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  5. Als_g06389

Als_g06389


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g06389

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00241920 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
AMTR_s00010p00262470 OTP85 Pentatricopeptide repeat-containing protein At2g02980,... 0.02 OrthoFinder output from all 47 species
AMTR_s00016p00259690 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g46460,... 0.03 OrthoFinder output from all 47 species
AMTR_s00061p00127300 MEF22,... Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
AMTR_s00099p00097640 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g39530... 0.02 OrthoFinder output from all 47 species
AMTR_s00170p00032020 OTP86,... Pentatricopeptide repeat-containing protein At5g16860... 0.02 OrthoFinder output from all 47 species
AT1G05750 PDE247, CLB19 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G74600 No alias pentatricopeptide (PPR) repeat-containing protein 0.02 OrthoFinder output from all 47 species
Adi_g003870 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005739 MEF19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005791 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g009482 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g034179 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035607 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036755 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036802 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g054256 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058169 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g064984 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069089 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079640 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g086048 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g086093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g095327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g096856 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g100622 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101334 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g114947 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21708 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g25067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42356 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42379 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g43288 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g24194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g28308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38174 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06797 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07040 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07162 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22752 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g56508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24083 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37589 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18568.t1 Aspi01Gene18568 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24271.t1 Aspi01Gene24271 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31801.t1 Aspi01Gene31801 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34104.t1 OTP84, Aspi01Gene34104 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34954.t1 Aspi01Gene34954 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene51735.t1 Aspi01Gene51735 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0004.g008648 No alias not classified & original description: CDS=1-2118 0.04 OrthoFinder output from all 47 species
Azfi_s0090.g042642 No alias not classified & original description: CDS=39-695 0.02 OrthoFinder output from all 47 species
Cba_g07049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07684 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g11529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20419 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31307 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g33342 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34643 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g35072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g71071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G007000.1 Ceric.09G007000 not classified & original description: pacid=50586983... 0.02 OrthoFinder output from all 47 species
Ceric.18G033700.1 OTP86, Ceric.18G033700 not classified & original description: pacid=50622086... 0.03 OrthoFinder output from all 47 species
Ceric.1Z254100.1 Ceric.1Z254100 not classified & original description: pacid=50632850... 0.02 OrthoFinder output from all 47 species
Ceric.25G027600.1 Ceric.25G027600 not classified & original description: pacid=50593377... 0.03 OrthoFinder output from all 47 species
Ceric.29G048500.1 Ceric.29G048500 not classified & original description: pacid=50625078... 0.03 OrthoFinder output from all 47 species
Ceric.36G058400.1 Ceric.36G058400 not classified & original description: pacid=50568396... 0.02 OrthoFinder output from all 47 species
Dac_g05509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25032 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35460 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39652 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42650 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43192 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07748 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07775 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07831 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08229 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08252 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08566 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16950 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17201 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21476 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g22287 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g22855 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g23686 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g29816 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g32153 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g36058 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g37501 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g38407 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38644 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g38658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g39633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40967 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g44574 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g44865 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g44978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g46123 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g46494 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g46679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g49789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04371 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04874 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28518 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g37552 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16109 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18910 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01024588001 OTP82 Pentatricopeptide repeat-containing protein At1g08070,... 0.02 OrthoFinder output from all 47 species
GSVIVT01025574001 No alias Pentatricopeptide repeat-containing protein At2g37320... 0.02 OrthoFinder output from all 47 species
LOC_Os06g47920.1 LOC_Os06g47920 Pentatricopeptide repeat-containing protein At5g44230... 0.03 OrthoFinder output from all 47 species
Len_g07899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17590 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g22535 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03398 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05587 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05666 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06187 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07068 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07419 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07741 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07771 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14103 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g14946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16104 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22099 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33303 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10432704g0020 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
MA_11074g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
MA_385322g0010 OTP82 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Msp_g02471 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g02475 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g23153 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g46847 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26843 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32143 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38571 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03417 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11781 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12790 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20232 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57723 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63646 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g63898 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g03133 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20310 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17174 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56302 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002433 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003527 EMB2758 not classified & original description: CDS=1-1284 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014492 No alias not classified & original description: CDS=1-2247 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019336 No alias not classified & original description: CDS=1-1245 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022190 No alias not classified & original description: CDS=1-2487 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0152.g023491 No alias not classified & original description: CDS=1-2331 0.03 OrthoFinder output from all 47 species
Sam_g03180 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14564 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19460 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g21956 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo34638 REME1 Pentatricopeptide repeat-containing protein At2g03880,... 0.02 OrthoFinder output from all 47 species
Smo81279 EMB2261 Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Solyc11g006700.1.1 Solyc11g006700 Pentatricopeptide repeat-containing protein At5g04780,... 0.03 OrthoFinder output from all 47 species
Spa_g15290 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g03497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06116 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06630 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g12143 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17143 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21286 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23000 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27040 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30423 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g43830 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e021453_P001 CRR28, Zm00001e021453 Pentatricopeptide repeat-containing protein At5g06540... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 150 173
IPR002885 Pentatricopeptide_repeat 380 410
IPR002885 Pentatricopeptide_repeat 680 704
IPR002885 Pentatricopeptide_repeat 352 374
IPR002885 Pentatricopeptide_repeat 601 652
IPR046848 E_motif 724 782
IPR002885 Pentatricopeptide_repeat 478 525
IPR002885 Pentatricopeptide_repeat 176 222
IPR002885 Pentatricopeptide_repeat 277 323
IPR002885 Pentatricopeptide_repeat 75 121
No external refs found!