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  5. Als_g06777

Als_g06777


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g06777
Cluster HCCA: Cluster_263

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00081p00056740 OTP82,... Pentatricopeptide repeat-containing protein At1g08070,... 0.03 OrthoFinder output from all 47 species
AT3G15130 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G25970 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G40405 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G52850 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g005609 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005726 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g012462 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g018748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g023326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g066704 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g066722 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g095327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g105303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g28165 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g32458 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g38435 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07448 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18909 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19077 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19184 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g19262 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g24106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26507 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26570 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30496 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30769 MEF21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55143 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g59184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g59722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04254 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06648 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g69406 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0015.g013967 No alias not classified & original description: CDS=1-2631 0.03 OrthoFinder output from all 47 species
Azfi_s0081.g038619 No alias not classified & original description: CDS=1-4530 0.04 OrthoFinder output from all 47 species
Azfi_s0210.g058082 No alias not classified & original description: CDS=1-2637 0.03 OrthoFinder output from all 47 species
Azfi_s1396.g102567 No alias not classified & original description: CDS=1-1371 0.02 OrthoFinder output from all 47 species
Cba_g03311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05295 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07049 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g07228 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19562 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20102 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20419 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g22369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g23772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25710 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45094 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g58731 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g78717 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.38G063600.1 Ceric.38G063600 not classified & original description: pacid=50580365... 0.03 OrthoFinder output from all 47 species
Dac_g36002 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05677 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06434 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08889 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g12787 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g17299 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17915 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g23686 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g29816 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g39176 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g40971 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g43326 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g46494 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50153 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22659 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010898001 No alias Pentatricopeptide repeat-containing protein At2g34400... 0.02 OrthoFinder output from all 47 species
LOC_Os08g33700.1 LOC_Os08g33700 Pentatricopeptide repeat-containing protein At3g47530... 0.03 OrthoFinder output from all 47 species
LOC_Os10g34720.1 LOI1, MEF11,... Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Len_g03388 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g08595 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18315 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24653 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26316 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g33065 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g36973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g47516 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07127 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_474261g0010 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
MA_60579g0010 OTP84 Pentatricopeptide repeat-containing protein At2g22070... 0.02 OrthoFinder output from all 47 species
MA_95261g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Msp_g03943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g33833 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g13996 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27953 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g32625 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38627 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g36018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39723 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g48074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61035 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13972 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo86162 CRR2 Pentatricopeptide repeat-containing protein At4g14820... 0.03 OrthoFinder output from all 47 species
Spa_g14566 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g28927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g44822 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g44069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001007_P001 Zm00001e001007 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Zm00001e001038_P001 CRR2, Zm00001e001038 Pentatricopeptide repeat-containing protein At1g08070,... 0.02 OrthoFinder output from all 47 species
Zm00001e029450_P001 Zm00001e029450 Pentatricopeptide repeat-containing protein At2g46050,... 0.02 OrthoFinder output from all 47 species
Zm00001e031660_P001 Zm00001e031660 Pentatricopeptide repeat-containing protein At4g14170... 0.02 OrthoFinder output from all 47 species
Zm00001e040920_P001 Zm00001e040920 Pentatricopeptide repeat-containing protein At3g26540... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 18 66
IPR002885 Pentatricopeptide_repeat 95 117
IPR002885 Pentatricopeptide_repeat 124 150
No external refs found!