Als_g06887 (RARE1)


Aliases : RARE1

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g06887

Target Alias Description ECC score Gene Family Method Actions
Adi_g002514 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035614 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035616 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036562 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036822 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g106007 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g15170 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04222 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04818 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05247 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06948 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g07235 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g07375 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07386 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g18037 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18909 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g19093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19184 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30496 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30627 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30736 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30769 MEF21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39559 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g39900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55801 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g59722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61080 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g62639 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05250 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27596 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g39832 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02020 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68048 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g69999 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70790.t1 Aspi01Gene70790 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0052.g031587 No alias not classified & original description: CDS=171-3077 0.03 OrthoFinder output from all 47 species
Azfi_s0073.g037188 CRR22 not classified & original description: CDS=1-1875 0.04 OrthoFinder output from all 47 species
Azfi_s0074.g037385 OTP84 not classified & original description: CDS=80-2584 0.03 OrthoFinder output from all 47 species
Cba_g04039 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05269 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05270 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05966 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06583 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07323 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07412 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20419 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20659 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20780 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g21823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g23772 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g31307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45094 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67667 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67843 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g74880 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75407 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75784 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g78717 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G002600.1 Ceric.04G002600 not classified & original description: pacid=50631990... 0.04 OrthoFinder output from all 47 species
Ceric.04G068200.1 OTP86, Ceric.04G068200 not classified & original description: pacid=50632337... 0.03 OrthoFinder output from all 47 species
Ceric.18G014200.1 VAC1, ECB2,... not classified & original description: pacid=50622305... 0.03 OrthoFinder output from all 47 species
Ceric.20G063400.1 Ceric.20G063400 not classified & original description: pacid=50566354... 0.04 OrthoFinder output from all 47 species
Ceric.22G050700.1 Ceric.22G050700 not classified & original description: pacid=50614024... 0.03 OrthoFinder output from all 47 species
Ceric.26G017800.1 Ceric.26G017800 not classified & original description: pacid=50599016... 0.04 OrthoFinder output from all 47 species
Dac_g35222 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05274 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08727 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08886 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17242 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g29816 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g40971 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g45918 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g45940 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03432 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g06677 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g14560 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g04815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05370 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g09274 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g12672 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g17578 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g17579 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18487 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g25719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g33767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g51192 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05649 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06094 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06167 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g07360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07385 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12699 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16407 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g23171 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g24085 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25823 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10430171g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
MA_111990g0010 REME1 Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
MA_117650g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_179801g0020 EMB2261 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Msp_g03882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g04483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24627 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48923 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g42294 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02495 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g03106 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08638 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12406 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13510 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20392 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19854 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30635 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011560 No alias not classified & original description: CDS=661-2424 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018685 No alias not classified & original description: CDS=1-1332 0.06 OrthoFinder output from all 47 species
Smo76175 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Solyc12g099850.1.1 Solyc12g099850 Pentatricopeptide repeat-containing protein At1g18485... 0.05 OrthoFinder output from all 47 species
Spa_g05105 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g05402 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g06014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20286 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04172 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12995 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17476 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17584 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g30039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 142 191
No external refs found!