Als_g06995


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g06995

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00035580 No alias Pentatricopeptide repeat-containing protein At5g44230... 0.02 OrthoFinder output from all 47 species
AMTR_s00092p00078040 No alias Pentatricopeptide repeat-containing protein At4g35130,... 0.03 OrthoFinder output from all 47 species
AT1G03540 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G34400 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G46790 CRR2 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g003262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g007371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17868 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16565 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g17592 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g18876 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g21860 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36200 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g57966 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g63751 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27296 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37100 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37575 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g27362 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34104.t1 OTP84, Aspi01Gene34104 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34744.t1 Aspi01Gene34744 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42676.t1 Aspi01Gene42676 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0216.g058493 No alias not classified & original description: CDS=1-2574 0.03 OrthoFinder output from all 47 species
Azfi_s1707.g105997 No alias not classified & original description: CDS=1-2574 0.03 OrthoFinder output from all 47 species
Cba_g04726 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05302 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06933 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20250 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29381 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g57497 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67729 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G014900.1 Ceric.10G014900 not classified & original description: pacid=50613343... 0.03 OrthoFinder output from all 47 species
Dac_g12454 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24639 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27446 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g32529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08045 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26802 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45797 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g06719 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23651 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25446 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46783 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25037 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01033389001 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Len_g04361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g09279 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g14105 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g19030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19456 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g40999 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06697 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07314 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10550 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24382 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_7907g0020 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
Msp_g34466 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g38728 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g46446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g05901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07619 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g32034 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03091 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12523 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g51366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63511 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g18373 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07560 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12011 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13105 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g27062 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53979 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g36161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06871 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14170 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23985 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g30211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g48112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53142 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06527 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06639 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g10298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g16806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17584 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22908 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23122 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30419 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g39862 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 240 262
IPR002885 Pentatricopeptide_repeat 268 288
IPR002885 Pentatricopeptide_repeat 163 212
No external refs found!