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  5. Als_g07182

Als_g07182


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g07182
Cluster HCCA: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
AT1G31010 OSB4 organellar single-stranded DNA binding protein 4 0.02 OrthoFinder output from all 47 species
AT1G31430 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G18520 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G13230 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G50990 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g069068 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12969 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g13481 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene35394.t1 Aspi01Gene35394 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene41675.t1 CRR2, Aspi01Gene41675 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0022.g016134 OTP84 not classified & original description: CDS=1-2358 0.06 OrthoFinder output from all 47 species
Azfi_s0652.g081079 No alias not classified & original description: CDS=1-2169 0.05 OrthoFinder output from all 47 species
Azfi_s0758.g085492 No alias not classified & original description: CDS=1-2652 0.04 OrthoFinder output from all 47 species
Cba_g03378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G060300.1 CRR22, Ceric.23G060300 not classified & original description: pacid=50610371... 0.03 OrthoFinder output from all 47 species
Ceric.26G035200.1 Ceric.26G035200 not classified & original description: pacid=50599772... 0.03 OrthoFinder output from all 47 species
Dcu_g07162 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16929 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g47943 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g03462 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19361 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g20638 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26389 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01030836001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
LOC_Os03g56400.1 LOC_Os03g56400 Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
LOC_Os05g38190.2 LOC_Os05g38190 Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species
Len_g54965 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g05630 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g41397 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g05844 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g21836 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g05957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g16172 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012770 No alias not classified & original description: CDS=1-1605 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019295 No alias not classified & original description: CDS=1-1539 0.02 OrthoFinder output from all 47 species
Sam_g24307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo16626 No alias Pentatricopeptide repeat-containing protein At4g16835,... 0.04 OrthoFinder output from all 47 species
Spa_g26573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 127 151
IPR002885 Pentatricopeptide_repeat 24 53
IPR002885 Pentatricopeptide_repeat 89 117
No external refs found!