Als_g07484


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g07484

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00263110 No alias Pentatricopeptide repeat-containing protein At1g03540... 0.02 OrthoFinder output from all 47 species
AMTR_s00022p00127120 CRR22,... Pentatricopeptide repeat-containing protein At3g09040,... 0.03 OrthoFinder output from all 47 species
AMTR_s00063p00172440 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
AT1G11290 CRR22 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G15510 VAC1, ECB2, ATECB2 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G18485 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G47720 OSB1 Primosome PriB/single-strand DNA-binding 0.02 OrthoFinder output from all 47 species
AT3G63370 OTP86 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G03800 emb1899, EMB175, EMB166 Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G44785 OSB3 organellar single-stranded DNA binding protein 3 0.04 OrthoFinder output from all 47 species
Adi_g002608 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g007663 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g020508 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g021050 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g022043 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036754 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036845 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g040548 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g043352 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g066744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069101 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079527 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g083164 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g098198 SLO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g101179 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g118106 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g17657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30426 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g13913 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27603 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g32690 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04578 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28530 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01012.t1 REME1, Aspi01Gene01012 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0059.g034605 No alias ssDNA-binding protein *(OSB) & original description: CDS=21-2777 0.03 OrthoFinder output from all 47 species
Azfi_s0095.g043572 No alias not classified & original description: CDS=1-2958 0.03 OrthoFinder output from all 47 species
Cba_g06542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10212 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g18809 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g21792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25710 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g30018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g76849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G039400.1 Ceric.03G039400 not classified & original description: pacid=50571919... 0.03 OrthoFinder output from all 47 species
Ceric.29G060200.1 Ceric.29G060200 not classified & original description: pacid=50624987... 0.03 OrthoFinder output from all 47 species
Ceric.32G058000.1 Ceric.32G058000 not classified & original description: pacid=50598467... 0.03 OrthoFinder output from all 47 species
Ceric.33G050800.1 CRR22, Ceric.33G050800 not classified & original description: pacid=50606654... 0.03 OrthoFinder output from all 47 species
Ceric.34G063100.1 Ceric.34G063100 not classified & original description: pacid=50623551... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000851.30 No alias Pentatricopeptide repeat-containing protein At5g61990,... 0.03 OrthoFinder output from all 47 species
Dac_g37184 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07101 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07737 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08560 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08566 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08876 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12070 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21476 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g22538 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36077 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38682 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43303 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43323 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g44186 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47764 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16071 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011333001 SLO1 Pentatricopeptide repeat-containing protein At1g08070,... 0.03 OrthoFinder output from all 47 species
GSVIVT01031251001 LPA66 Pentatricopeptide repeat-containing protein At5g48910... 0.03 OrthoFinder output from all 47 species
GSVIVT01033190001 OTP82 Pentatricopeptide repeat-containing protein At5g66520... 0.02 OrthoFinder output from all 47 species
GSVIVT01037944001 No alias Pentatricopeptide repeat-containing protein At1g50270... 0.03 OrthoFinder output from all 47 species
Gb_17916 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
LOC_Os01g41650.1 LOC_Os01g41650 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
LOC_Os03g43420.1 OSB1, LOC_Os03g43420 ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
Len_g00981 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g14520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17570 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g24341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g43456 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54969 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g34619 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37539 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39841 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03905 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g14901 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g22363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g22834 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28529 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g42868 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g43041 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g44897 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45898 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g16025 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20199 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23755 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g28136 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g06239 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g08941 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02551 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02840 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02848 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03328 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05418 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g08446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12220 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12598 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20517 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57724 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57929 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57944 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g58274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63649 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63860 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63879 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03152 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30093 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07521 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13845 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14956 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30840 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g35966 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g40829 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g43481 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53393 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004070 CRR22 not classified & original description: CDS=1-2127 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004386 No alias not classified & original description: CDS=1-2367 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010124 No alias ssDNA-binding protein *(OSB) & original description: CDS=208-2547 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0215.g026034 OTP84 not classified & original description: CDS=2081-4369 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0244.g026675 No alias not classified & original description: CDS=1-1575 0.03 OrthoFinder output from all 47 species
Sam_g02933 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27788 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g007850.2.1 Solyc01g007850 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Solyc01g081020.1.1 Solyc01g081020 RNA editing factor (OTP80) 0.03 OrthoFinder output from all 47 species
Spa_g53894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05629 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08973 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g30138 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g39862 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007042_P001 Zm00001e007042 RNA editing factor (AEF1) 0.03 OrthoFinder output from all 47 species
Zm00001e029186_P001 Zm00001e029186 Pentatricopeptide repeat-containing protein At1g19720... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003919 FMN adenylyltransferase activity IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 595 620
IPR002885 Pentatricopeptide_repeat 695 719
IPR002885 Pentatricopeptide_repeat 418 467
IPR002885 Pentatricopeptide_repeat 621 668
IPR002885 Pentatricopeptide_repeat 318 365
IPR002885 Pentatricopeptide_repeat 520 568
No external refs found!