1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g09230

Als_g09230


Description : component *(uS3c) of small plastid ribosomal-subunit proteome & original description: none


Gene families : OG0006596 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006596_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g09230

Target Alias Description ECC score Gene Family Method Actions
ATCG00800 No alias structural constituent of ribosome 0.07 OrthoFinder output from all 47 species
Aev_g14422 No alias component *(uS3c) of small plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Aob_g23172 No alias component *(uS3c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Ceric.05G042400.1 Ceric.05G042400 component *(uS3c) of small plastid ribosomal-subunit... 0.15 OrthoFinder output from all 47 species
Ceric.29G068400.1 Ceric.29G068400 component *(uS3c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Ceric.38G009200.1 Ceric.38G009200 component *(uS3c) of small plastid ribosomal-subunit... 0.15 OrthoFinder output from all 47 species
Dcu_g13090 No alias component *(uS3c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Gb_15033 No alias component psRPS3 of small ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
LOC_Os04g16824.1 LOC_Os04g16824 component psRPS3 of small ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
Pir_g00314 No alias component *(uS3c) of small plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Sacu_v1.1_s3366.g028730 No alias not classified & original description: CDS=1-393 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s3471.g028813 No alias component *(uS3c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Solyc00g500034.1.1 Solyc00g500034 component psRPL22 of large ribosomal subunit proteome.... 0.03 OrthoFinder output from all 47 species
Zm00001e011301_P001 Zm00001e011301 component psRPS3 of small ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Zm00001e042087_P001 Zm00001e042087 component psRPS3 of small ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR001351 Ribosomal_S3_C 131 213
No external refs found!