Als_g09936 (GNC, GATA21)

Aliases : GNC, GATA21

Description : transcription factor *(A/B-GATA) & original description: none

Gene families : OG0000100 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000100_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g09936
Cluster	HCCA: Cluster_236

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00004p00074220	GATA4,...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
AT3G50870	HAN, MNP, GATA18	GATA type zinc finger transcription factor family protein	0.02	OrthoFinder output from all 47 species
Adi_g024585	GATA22, CGA1, GNL	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g055234	GATA4	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g088429	GATA22, CGA1, GNL	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g098113	No alias	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g107332	GNC, GATA21	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g02172	GNC, GATA21	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g07810	GATA5	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene06728.t1	GNC, GATA21,...	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene35992.t1	GATA23, Aspi01Gene35992	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g36695	GATA15	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.25G042500.1	GATA22, CGA1,...	transcription factor *(A/B-GATA) & original description:...	0.03	OrthoFinder output from all 47 species
Cre10.g435450	GATA1	RNA biosynthesis.transcriptional activation.C2C2...	0.01	OrthoFinder output from all 47 species
Dac_g06438	GNC, GATA21	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g20454	GNC, GATA21	transcription factor *(A/B-GATA) & original description: none	0.05	OrthoFinder output from all 47 species
Ehy_g28792	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
LOC_Os04g45650.2	GATA5, LOC_Os04g45650	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
Ppi_g02115	GATA9	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g53963	GNC, GATA21	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000079	GATA9	transcription factor *(A/B-GATA) & original description:...	0.03	OrthoFinder output from all 47 species
Sam_g13372	No alias	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc03g033660.4.1	GATA5, Solyc03g033660	transcription factor (GATA)	0.02	OrthoFinder output from all 47 species
Spa_g47175	GNC, GATA21	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g18035	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e007391_P002	GATA5, Zm00001e007391	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
Zm00001e028245_P001	GATA23, Zm00001e028245	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003682	chromatin binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000679	Znf_GATA	316	350

External Links

No external refs found!

Als_g09936 (GNC, GATA21)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation