1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g10258

Als_g10258


Description : not classified & original description: none


Gene families : OG0006276 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006276_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g10258
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
Aob_g15841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19587 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g20291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26041 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0008535 respiratory chain complex IV assembly IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP HCCA
BP GO:0033617 mitochondrial cytochrome c oxidase assembly IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR010666 Znf_GRF 207 250
IPR010666 Znf_GRF 269 313
IPR001878 Znf_CCHC 341 357
IPR001878 Znf_CCHC 449 466
IPR001878 Znf_CCHC 387 403
IPR001878 Znf_CCHC 530 544
IPR001878 Znf_CCHC 167 182
IPR001878 Znf_CCHC 482 498
No external refs found!