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  5. Als_g10776

Als_g10776


Description : not classified & original description: none


Gene families : OG0000144 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g10776
Cluster HCCA: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00168800 evm_27.TU.AmTr_v1... Zinc finger A20 and AN1 domain-containing... 0.04 OrthoFinder output from all 47 species
AT3G52800 No alias A20/AN1-like zinc finger family protein 0.02 OrthoFinder output from all 47 species
Adi_g011057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g012490 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g112620 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g01907 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g39179 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.15G076000.1 Ceric.15G076000 not classified & original description: pacid=50640210... 0.03 OrthoFinder output from all 47 species
LOC_Os07g07350.3 LOC_Os07g07350 Zinc finger A20 and AN1 domain-containing... 0.04 OrthoFinder output from all 47 species
LOC_Os08g39450.1 LOC_Os08g39450 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
LOC_Os09g31200.1 LOC_Os09g31200 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Msp_g24579 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0049.g013704 No alias not classified & original description: CDS=1-681 0.02 OrthoFinder output from all 47 species
Spa_g05140 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR000058 Znf_AN1 111 147
IPR002653 Znf_A20 22 45
No external refs found!