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  5. Als_g11443

Als_g11443 (ATMBD6, MBD6)


Aliases : ATMBD6, MBD6

Description : methylation reader *(MBD5-6) & original description: none


Gene families : OG0000559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000559_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g11443

Target Alias Description ECC score Gene Family Method Actions
Adi_g058770 ATMBD6, MBD6 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g061124 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09047 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07123 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02183.t1 MBD05, MBD5,... methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene60608.t1 MBD05, MBD5,... methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04582 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G019600.1 ATMBD6, MBD6,... not classified & original description: pacid=50637929... 0.03 OrthoFinder output from all 47 species
Dac_g09713 MBD05, MBD5, ATMBD5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g10163 No alias methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07042 MBD05, MBD5, ATMBD5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g18783 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g42606 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g04554 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13428 ATMBD6, MBD6 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_12376 MBD05, MBD5, ATMBD5 methylation reader (MBD5-6) 0.03 OrthoFinder output from all 47 species
Len_g37533 No alias methylation reader *(MBD5-6) & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g10342 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g01254 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09473 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015792 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: CDS=471-2042 0.03 OrthoFinder output from all 47 species
Sam_g50687 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g080690.4.1 Solyc08g080690 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g50004 No alias methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02100 No alias methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
InterPro domains Description Start Stop
IPR001739 Methyl_CpG_DNA-bd 423 472
No external refs found!