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  5. Als_g11474

Als_g11474


Description : not classified & original description: none


Gene families : OG0000642 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000642_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g11474

Target Alias Description ECC score Gene Family Method Actions
Adi_g022185 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g115931 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g14819 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g22163 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene57383.t1 Aspi01Gene57383 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g009796 No alias not classified & original description: CDS=86-811 0.03 OrthoFinder output from all 47 species
Cba_g14713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g13809 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g07449 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Dde_g23747 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g04385 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g19804 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01011624001 No alias Binding partner of ACD11 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01020030001 No alias Binding partner of ACD11 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os03g50560.1 LOC_Os03g50560 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os03g53770.1 LOC_Os03g53770 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os04g50790.1 LOC_Os04g50790 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os04g54870.1 LOC_Os04g54870 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g55926 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04564 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp3g08610.1 No alias Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Nbi_g03642 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Pnu_g27405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c19_9760V3.1 Pp3c19_9760 RNA-binding (RRM/RBD/RNP motifs) family protein 0.01 OrthoFinder output from all 47 species
Ppi_g00654 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07450 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07486 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Sam_g11660 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc08g076530.3.1 Solyc08g076530 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc10g076890.3.1 Solyc10g076890 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g38160 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g05834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e012039_P002 Zm00001e012039 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e012169_P002 Zm00001e012169 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 48 99
No external refs found!