Pnu_g11481

Description : not classified & original description: none

Gene families : OG0000484 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000484_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pnu_g11481

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00029p00182780	evm_27.TU.AmTr_v1...	No description available	0.02	OrthoFinder output from all 47 species
AT3G09760	No alias	RING/U-box superfamily protein	0.03	OrthoFinder output from all 47 species
GSVIVT01025179001	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.04	OrthoFinder output from all 47 species
Gb_27920	No alias	RING-v-class E3 ligase	0.02	OrthoFinder output from all 47 species
LOC_Os06g46366.1	LOC_Os06g46366	RING-v-class E3 ligase	0.02	OrthoFinder output from all 47 species
Tin_g32634	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011016	Znf_RING-CH	148	195

External Links

No external refs found!