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  5. Als_g12392

Als_g12392


Description : component *(uS10c) of small plastid ribosomal-subunit proteome & original description: none


Gene families : OG0005087 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005087_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g12392
Cluster HCCA: Cluster_257

Target Alias Description ECC score Gene Family Method Actions
AT3G13120 No alias Ribosomal protein S10p/S20e family protein 0.04 OrthoFinder output from all 47 species
Ala_g00684 No alias component *(uS10c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Aspi01Gene11300.t1 Aspi01Gene11300 component *(uS10c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Azfi_s0015.g013794 No alias component *(uS10c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Cba_g65626 No alias component *(uS10c) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ceric.34G039900.1 Ceric.34G039900 component *(uS10c) of small plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Cre03.g195650 No alias Protein biosynthesis.organelle translation... 0.07 OrthoFinder output from all 47 species
Dcu_g02308 No alias component *(uS10c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Dcu_g40455 No alias component *(uS10c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Dde_g03129 No alias component *(uS10c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ehy_g00382 No alias component *(uS10c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
GSVIVT01014640001 No alias Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
LOC_Os03g10060.1 LOC_Os03g10060 component psRPS10 of small ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
Len_g05104 No alias component *(uS10c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Lfl_g00728 No alias component *(uS10c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Mp7g14220.1 No alias component psRPS10 of small ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species
Nbi_g28161 No alias component *(uS10c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Pir_g59109 No alias component *(uS10c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Pp3c20_8830V3.1 Pp3c20_8830 Ribosomal protein S10p/S20e family protein 0.05 OrthoFinder output from all 47 species
Pp3c24_19230V3.1 Pp3c24_19230 Ribosomal protein S10p/S20e family protein 0.04 OrthoFinder output from all 47 species
Ppi_g10665 No alias component *(uS10c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Solyc10g006030.3.1 Solyc10g006030 component psRPS10 of small ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Spa_g54664 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09762 No alias component *(uS10c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Zm00001e000789_P001 Zm00001e000789 component psRPS10 of small ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Zm00001e038796_P002 Zm00001e038796 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR027486 Ribosomal_S10_dom 94 188
No external refs found!