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  5. Als_g12623

Als_g12623


Description : component *(CHL-B) of light-independent protochlorophyllide oxidoreductase complex & original description: none


Gene families : OG0008656 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008656_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g12623
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
Aev_g23246 No alias component *(CHL-B) of light-independent... 0.18 OrthoFinder output from all 47 species
Ala_g08414 No alias component *(CHL-B) of light-independent... 0.23 OrthoFinder output from all 47 species
Aob_g13080 No alias component *(CHL-B) of light-independent... 0.11 OrthoFinder output from all 47 species
Cba_g01188 No alias component *(CHL-B) of light-independent... 0.17 OrthoFinder output from all 47 species
Ceric.01G057200.1 Ceric.01G057200 component *(CHL-B) of light-independent... 0.16 OrthoFinder output from all 47 species
Ceric.01G104800.1 Ceric.01G104800 component *(CHL-B) of light-independent... 0.05 OrthoFinder output from all 47 species
Ceric.03G100100.1 Ceric.03G100100 component *(CHL-B) of light-independent... 0.07 OrthoFinder output from all 47 species
Ceric.05G040700.1 Ceric.05G040700 component *(CHL-B) of light-independent... 0.04 OrthoFinder output from all 47 species
Ceric.1Z116800.1 Ceric.1Z116800 not classified & original description: pacid=50576998... 0.07 OrthoFinder output from all 47 species
Ceric.26G042500.1 Ceric.26G042500 component *(CHL-B) of light-independent... 0.15 OrthoFinder output from all 47 species
Ceric.29G005700.1 Ceric.29G005700 component *(CHL-B) of light-independent... 0.07 OrthoFinder output from all 47 species
Dde_g08116 No alias component *(CHL-B) of light-independent... 0.13 OrthoFinder output from all 47 species
Gb_27606 No alias component CHL-B of light-independent protochlorophyllide... 0.08 OrthoFinder output from all 47 species
Lfl_g36498 No alias component *(CHL-B) of light-independent... 0.09 OrthoFinder output from all 47 species
Nbi_g02098 No alias component *(CHL-B) of light-independent... 0.17 OrthoFinder output from all 47 species
Pir_g06122 No alias component *(CHL-B) of light-independent... 0.07 OrthoFinder output from all 47 species
Sam_g03855 No alias component *(CHL-B) of light-independent... 0.08 OrthoFinder output from all 47 species
Smo137837 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.07 OrthoFinder output from all 47 species
Tin_g19518 No alias component *(CHL-B) of light-independent... 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0042773 ATP synthesis coupled electron transport IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013580 LI-POR_suB-like_C 464 508
IPR000510 Nase/OxRdtase_comp1 12 431
No external refs found!