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  5. Als_g12767

Als_g12767 (CRR2)


Aliases : CRR2

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g12767
Cluster HCCA: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00113430 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g18485... 0.01 OrthoFinder output from all 47 species
AMTR_s00019p00240430 OSB3,... RNA biosynthesis.organelle machineries.RNA polymerase... 0.02 OrthoFinder output from all 47 species
AMTR_s00081p00019740 CRR22,... Pentatricopeptide repeat-containing protein At5g27110... 0.03 OrthoFinder output from all 47 species
Adi_g003829 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g015735 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g024762 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g034832 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069152 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g081945 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g083315 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06424 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07824 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09082 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g11910 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13180 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13670 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g14691 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16631 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16836 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16990 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g19188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20702 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g21667 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g23793 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g24095 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g24412 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24413 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g35613 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g35876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36202 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36549 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g38713 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14332 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g07336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09073 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g12583 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23810 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g24197 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26670 OTP82 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g27291 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27921 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36268 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aob_g37337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37347 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37584 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g42859 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene00250.t1 Aspi01Gene00250 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02464.t1 Aspi01Gene02464 ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene02536.t1 Aspi01Gene02536 ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene22967.t2 Aspi01Gene22967 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34548.t1 Aspi01Gene34548 ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene34798.t1 Aspi01Gene34798 ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene34811.t1 Aspi01Gene34811 ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene34884.t1 Aspi01Gene34884 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0002.g001369 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: CDS=172-2610 0.02 OrthoFinder output from all 47 species
Azfi_s0083.g038894 CRR2 not classified & original description: CDS=273-1679 0.02 OrthoFinder output from all 47 species
Azfi_s0215.g058372 No alias not classified & original description: CDS=1-2739 0.04 OrthoFinder output from all 47 species
Azfi_s0383.g067429 No alias not classified & original description: CDS=1-1644 0.07 OrthoFinder output from all 47 species
Cba_g06580 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g07743 OTP86 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g15277 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g18562 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19296 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19771 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19795 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g27620 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75409 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g76750 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G081900.1 Ceric.07G081900 not classified & original description: pacid=50627936... 0.03 OrthoFinder output from all 47 species
Ceric.07G091600.1 Ceric.07G091600 not classified & original description: pacid=50627346... 0.02 OrthoFinder output from all 47 species
Ceric.12G025700.1 Ceric.12G025700 not classified & original description: pacid=50601618... 0.03 OrthoFinder output from all 47 species
Ceric.12G060700.1 Ceric.12G060700 not classified & original description: pacid=50600993... 0.03 OrthoFinder output from all 47 species
Ceric.13G076400.1 Ceric.13G076400 not classified & original description: pacid=50635248... 0.02 OrthoFinder output from all 47 species
Ceric.15G074900.1 Ceric.15G074900 not classified & original description: pacid=50640124... 0.04 OrthoFinder output from all 47 species
Ceric.21G062800.1 Ceric.21G062800 not classified & original description: pacid=50603272... 0.02 OrthoFinder output from all 47 species
Ceric.22G064700.1 Ceric.22G064700 not classified & original description: pacid=50614857... 0.04 OrthoFinder output from all 47 species
Ceric.28G069900.1 Ceric.28G069900 not classified & original description: pacid=50570610... 0.03 OrthoFinder output from all 47 species
Ceric.38G063600.1 Ceric.38G063600 not classified & original description: pacid=50580365... 0.03 OrthoFinder output from all 47 species
Ceric.39G011500.1 Ceric.39G011500 not classified & original description: pacid=50582697... 0.02 OrthoFinder output from all 47 species
Dde_g12346 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g21670 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22165 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15341 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g20526 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24725 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g26697 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
LOC_Os11g45410.1 LOC_Os11g45410 Pentatricopeptide repeat-containing protein At4g13650... 0.06 OrthoFinder output from all 47 species
Len_g18296 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g44704 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54667 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04959 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07429 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g11824 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12543 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g14280 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14572 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15292 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g17711 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g33296 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g40177 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g40815 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g33669 OTP84 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Msp_g45751 No alias ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g44143 CRR22 not classified & original description: none 0.12 OrthoFinder output from all 47 species
Pir_g11796 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006801 EMB2261 not classified & original description: CDS=90-2282 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009016 No alias not classified & original description: CDS=1-2955 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009122 No alias not classified & original description: CDS=1-1917 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009148 No alias not classified & original description: CDS=1352-3946 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010335 No alias not classified & original description: CDS=1-1296 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g010995 No alias not classified & original description: CDS=1-2412 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014492 No alias not classified & original description: CDS=1-2247 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015039 No alias not classified & original description: CDS=1-1803 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015358 No alias not classified & original description: CDS=223-2631 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018377 REME1 not classified & original description: CDS=1-1548 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0086.g018386 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2118 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019284 No alias not classified & original description: CDS=34-390 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0168.g024290 No alias not classified & original description: CDS=1-2301 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0218.g026116 No alias not classified & original description: CDS=1-2901 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0244.g026676 No alias not classified & original description: CDS=1-2475 0.01 OrthoFinder output from all 47 species
Sam_g19797 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g24540 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39952 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g40196 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e028330_P001 PTAC9, OSB2,... ssDNA-binding protein (OSB). TAC9 cofactor of... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR046849 Eplus_motif 495 519
IPR002885 Pentatricopeptide_repeat 210 257
IPR002885 Pentatricopeptide_repeat 311 358
IPR032867 DYW_dom 526 618
IPR046848 E_motif 428 490
IPR002885 Pentatricopeptide_repeat 83 110
IPR002885 Pentatricopeptide_repeat 184 207
IPR002885 Pentatricopeptide_repeat 385 410
IPR002885 Pentatricopeptide_repeat 111 140
IPR002885 Pentatricopeptide_repeat 285 310
No external refs found!