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  5. Als_g13228

Als_g13228


Description : regulatory factor *(CURT) of thylakoid grana stacking & original description: none


Gene families : OG0000444 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000444_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g13228

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272260 PTAC8, TMP14,... Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.02 OrthoFinder output from all 47 species
AT2G46820 PTAC8, TMP14, PSI-P, PSAP photosystem I P subunit 0.02 OrthoFinder output from all 47 species
Adi_g011488 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Adi_g023582 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Adi_g075201 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Ala_g00922 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Aob_g02852 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Aob_g35859 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Aop_g49644 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.06 OrthoFinder output from all 47 species
Aop_g70950 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Azfi_s0335.g065535 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Ceric.05G101400.1 Ceric.05G101400 regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Ceric.25G072200.1 Ceric.25G072200 regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Dac_g00365 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Dac_g08388 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Dcu_g10196 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Dcu_g41769 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
GSVIVT01017074001 No alias Protein CURVATURE THYLAKOID 1C, chloroplastic... 0.03 OrthoFinder output from all 47 species
GSVIVT01028749001 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.03 OrthoFinder output from all 47 species
LOC_Os02g49870.1 LOC_Os02g49870 Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.05 OrthoFinder output from all 47 species
LOC_Os06g15400.1 LOC_Os06g15400 Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.03 OrthoFinder output from all 47 species
LOC_Os07g28610.1 PTAC8, TMP14,... Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.05 OrthoFinder output from all 47 species
Len_g15575 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Len_g38767 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Lfl_g21744 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Lfl_g34028 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
MA_60075g0010 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.03 OrthoFinder output from all 47 species
MA_734271g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_904218g0010 PTAC8, TMP14, PSI-P, PSAP no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g25670.1 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.05 OrthoFinder output from all 47 species
Mp6g20800.1 PTAC8, TMP14, PSI-P, PSAP Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.03 OrthoFinder output from all 47 species
Mp6g20860.1 No alias Protein CURVATURE THYLAKOID 1C, chloroplastic... 0.04 OrthoFinder output from all 47 species
Msp_g05299 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Msp_g06759 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Msp_g40930 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Nbi_g06087 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Nbi_g28257 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Nbi_g31183 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Pir_g48383 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.06 OrthoFinder output from all 47 species
Pp3c16_11960V3.1 Pp3c16_11960 No annotation 0.01 OrthoFinder output from all 47 species
Ppi_g12227 PTAC8, TMP14, PSI-P, PSAP regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Ppi_g18065 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Ppi_g18345 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007392 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0111.g020672 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Sam_g38625 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Solyc01g095430.3.1 Solyc01g095430 Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.03 OrthoFinder output from all 47 species
Solyc06g066620.4.1 Solyc06g066620 Protein CURVATURE THYLAKOID 1C, chloroplastic... 0.02 OrthoFinder output from all 47 species
Solyc10g005050.3.1 PTAC8, TMP14,... Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.02 OrthoFinder output from all 47 species
Solyc10g011770.4.1 Solyc10g011770 Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.02 OrthoFinder output from all 47 species
Spa_g05035 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Spa_g06784 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.07 OrthoFinder output from all 47 species
Spa_g06785 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Spa_g09664 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Spa_g24039 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Tin_g01454 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Zm00001e023473_P001 Zm00001e023473 Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.02 OrthoFinder output from all 47 species
Zm00001e029009_P001 Zm00001e029009 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e034870_P002 PTAC8, TMP14,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR025564 CAAD_dom 84 167
No external refs found!