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  5. Als_g13767

Als_g13767


Description : substrate adaptor of SCF E3 ubiquitin ligase complex & original description: none


Gene families : OG0000527 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000527_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g13767

Target Alias Description ECC score Gene Family Method Actions
Ala_g11457 FBW2 substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Cba_g06332 SKIP1 substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.04 OrthoFinder output from all 47 species
Cba_g24792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03539 FBW2 substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
LOC_Os02g21240.1 LOC_Os02g21240 Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp3g07000.1 No alias component F-box of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species
Msp_g17770 No alias regulatory protein *(FBW2) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Pir_g09613 SKIP1 substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.04 OrthoFinder output from all 47 species
Pir_g12415 FBW2 substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Ppi_g01116 SKIP1 substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0158.g023773 FBW2 not classified & original description: CDS=937-2064 0.02 OrthoFinder output from all 47 species
Solyc08g013820.3.1 Solyc08g013820 Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e027535_P001 Zm00001e027535 Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e037423_P003 Zm00001e037423 Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e040365_P001 Zm00001e040365 Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 40 81
No external refs found!