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  5. Als_g14331

Als_g14331


Description : component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im) complex & original description: none


Gene families : OG0002089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002089_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g14331

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00146760 evm_27.TU.AmTr_v1... RNA processing.RNA 3-end polyadenylation.Cleavage Factor... 0.03 OrthoFinder output from all 47 species
Adi_g035454 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g34624 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.02 OrthoFinder output from all 47 species
Ala_g02360 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.03 OrthoFinder output from all 47 species
Aob_g17567 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.03 OrthoFinder output from all 47 species
Aop_g12901 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.02 OrthoFinder output from all 47 species
Aspi01Gene16717.t1 Aspi01Gene16717 component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.03 OrthoFinder output from all 47 species
Cba_g11857 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.05 OrthoFinder output from all 47 species
Ceric.18G063400.1 Ceric.18G063400 component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.04 OrthoFinder output from all 47 species
Dcu_g05780 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.05 OrthoFinder output from all 47 species
Dcu_g09495 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.05 OrthoFinder output from all 47 species
Dcu_g10783 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.04 OrthoFinder output from all 47 species
Ehy_g13682 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.03 OrthoFinder output from all 47 species
Ehy_g22295 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.03 OrthoFinder output from all 47 species
Ehy_g30239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000588001 No alias RNA processing.RNA 3-end polyadenylation.Cleavage Factor... 0.03 OrthoFinder output from all 47 species
GSVIVT01014675001 No alias RNA processing.RNA 3-end polyadenylation.Cleavage Factor... 0.03 OrthoFinder output from all 47 species
Gb_11742 No alias component CPFS6/CFIm68 of Cleavage Factor I (CF-Im) complex 0.03 OrthoFinder output from all 47 species
Len_g15072 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.02 OrthoFinder output from all 47 species
Lfl_g03230 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.03 OrthoFinder output from all 47 species
Msp_g14142 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.03 OrthoFinder output from all 47 species
Pir_g01997 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.03 OrthoFinder output from all 47 species
Pir_g11326 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.04 OrthoFinder output from all 47 species
Pnu_g16653 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18790 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002196 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.03 OrthoFinder output from all 47 species
Sam_g13762 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.02 OrthoFinder output from all 47 species
Spa_g19034 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.03 OrthoFinder output from all 47 species
Spa_g48266 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.03 OrthoFinder output from all 47 species
Tin_g25202 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.03 OrthoFinder output from all 47 species
Zm00001e003418_P002 Zm00001e003418 component CPFS6/CFIm68 of Cleavage Factor I (CF-Im) complex 0.05 OrthoFinder output from all 47 species
Zm00001e024332_P002 Zm00001e024332 component CPFS6/CFIm68 of Cleavage Factor I (CF-Im) complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 337 405
No external refs found!