Description : component *(NSP2) of NSP1-NSP2 nodulation initiation complex & original description: none
Gene families : OG0002153 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002153_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Als_g14754 | |
| Cluster | HCCA: Cluster_217 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Als_g48062 | No alias | component *(NSP2) of NSP1-NSP2 nodulation initiation... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g06711 | No alias | component *(NSP2) of NSP1-NSP2 nodulation initiation... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g05346 | No alias | component *(NSP2) of NSP1-NSP2 nodulation initiation... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.18G071500.1 | Ceric.18G071500 | component *(NSP2) of NSP1-NSP2 nodulation initiation... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.37G042000.1 | Ceric.37G042000 | component *(NSP2) of NSP1-NSP2 nodulation initiation... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_25709 | No alias | transcription factor (GRAS). component NSP2 of NSP1-NSP2... | 0.01 | OrthoFinder output from all 47 species | |
| Len_g45970 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g28748 | No alias | component *(NSP2) of NSP1-NSP2 nodulation initiation... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g16636 | No alias | component *(NSP2) of NSP1-NSP2 nodulation initiation... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g24950 | No alias | component *(NSP2) of NSP1-NSP2 nodulation initiation... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005507 | copper ion binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0005984 | disaccharide metabolic process | IEP | HCCA |
| BP | GO:0005991 | trehalose metabolic process | IEP | HCCA |
| BP | GO:0005992 | trehalose biosynthetic process | IEP | HCCA |
| BP | GO:0006081 | cellular aldehyde metabolic process | IEP | HCCA |
| BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006644 | phospholipid metabolic process | IEP | HCCA |
| MF | GO:0008131 | primary amine oxidase activity | IEP | HCCA |
| BP | GO:0008654 | phospholipid biosynthetic process | IEP | HCCA |
| BP | GO:0009240 | isopentenyl diphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009308 | amine metabolic process | IEP | HCCA |
| BP | GO:0009311 | oligosaccharide metabolic process | IEP | HCCA |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | HCCA |
| MF | GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | IEP | HCCA |
| MF | GO:0016641 | oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor | IEP | HCCA |
| MF | GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | IEP | HCCA |
| MF | GO:0016726 | oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019288 | isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | IEP | HCCA |
| BP | GO:0019682 | glyceraldehyde-3-phosphate metabolic process | IEP | HCCA |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| BP | GO:0046351 | disaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0046490 | isopentenyl diphosphate metabolic process | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0048038 | quinone binding | IEP | HCCA |
| BP | GO:0050992 | dimethylallyl diphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0050993 | dimethylallyl diphosphate metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| MF | GO:0051745 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005202 | TF_GRAS | 493 | 862 |
| No external refs found! |
