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  5. Pnu_g11907

Pnu_g11907 (emb2726)


Aliases : emb2726

Description : translation elongation factor *(EF-Ts) & original description: none


Gene families : OG0003250 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003250_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g11907
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00129480 emb2726,... Protein biosynthesis.organelle translation... 0.05 OrthoFinder output from all 47 species
AT4G29060 emb2726 elongation factor Ts family protein 0.04 OrthoFinder output from all 47 species
Adi_g053355 emb2726 translation elongation factor *(EF-Ts) & original... 0.02 OrthoFinder output from all 47 species
Adi_g118105 emb2726 translation elongation factor *(EF-Ts) & original... 0.08 OrthoFinder output from all 47 species
Ala_g13148 emb2726 translation elongation factor *(EF-Ts) & original... 0.03 OrthoFinder output from all 47 species
Ala_g30187 emb2726 translation elongation factor *(EF-Ts) & original... 0.04 OrthoFinder output from all 47 species
Aob_g08834 emb2726 translation elongation factor *(EF-Ts) & original... 0.02 OrthoFinder output from all 47 species
Aop_g23631 emb2726 translation elongation factor *(EF-Ts) & original... 0.03 OrthoFinder output from all 47 species
Aop_g25286 emb2726 translation elongation factor *(EF-Ts) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene11644.t1 emb2726, Aspi01Gene11644 translation elongation factor *(EF-Ts) & original... 0.03 OrthoFinder output from all 47 species
Cba_g71569 emb2726 translation elongation factor *(EF-Ts) & original... 0.06 OrthoFinder output from all 47 species
Cba_g78300 emb2726 translation elongation factor *(EF-Ts) & original... 0.04 OrthoFinder output from all 47 species
Ceric.03G081000.1 emb2726, Ceric.03G081000 translation elongation factor *(EF-Ts) & original... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021319.56 emb2726 Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
Cre12.g519180 emb2726 Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
Dac_g05556 emb2726 translation elongation factor *(EF-Ts) & original... 0.05 OrthoFinder output from all 47 species
Dac_g16809 emb2726 translation elongation factor *(EF-Ts) & original... 0.06 OrthoFinder output from all 47 species
Dac_g16810 emb2726 translation elongation factor *(EF-Ts) & original... 0.04 OrthoFinder output from all 47 species
Dac_g19131 emb2726 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g01025 emb2726 translation elongation factor *(EF-Ts) & original... 0.03 OrthoFinder output from all 47 species
Dde_g06930 emb2726 translation elongation factor *(EF-Ts) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g05564 emb2726 translation elongation factor *(EF-Ts) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g26260 emb2726 translation elongation factor *(EF-Ts) & original... 0.03 OrthoFinder output from all 47 species
Gb_29672 emb2726 EF-Ts translation elongation factor 0.03 OrthoFinder output from all 47 species
LOC_Os12g35630.1 emb2726, LOC_Os12g35630 EF-Ts translation elongation factor 0.05 OrthoFinder output from all 47 species
Len_g59815 emb2726 translation elongation factor *(EF-Ts) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g09522 emb2726 translation elongation factor *(EF-Ts) & original... 0.04 OrthoFinder output from all 47 species
MA_10436165g0010 emb2726 EF-Ts translation elongation factor 0.05 OrthoFinder output from all 47 species
Mp2g23510.1 emb2726 EF-Ts translation elongation factor 0.04 OrthoFinder output from all 47 species
Msp_g12193 emb2726 translation elongation factor *(EF-Ts) & original... 0.04 OrthoFinder output from all 47 species
Nbi_g14225 emb2726 translation elongation factor *(EF-Ts) & original... 0.03 OrthoFinder output from all 47 species
Ore_g00299 emb2726 translation elongation factor *(EF-Ts) & original... 0.03 OrthoFinder output from all 47 species
Ore_g08953 emb2726 translation elongation factor *(EF-Ts) & original... 0.07 OrthoFinder output from all 47 species
Pir_g07418 emb2726 translation elongation factor *(EF-Ts) & original... 0.03 OrthoFinder output from all 47 species
Pir_g42601 emb2726 translation elongation factor *(EF-Ts) & original... 0.04 OrthoFinder output from all 47 species
Ppi_g11585 emb2726 translation elongation factor *(EF-Ts) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g29843 emb2726 translation elongation factor *(EF-Ts) & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0139.g022632 emb2726 translation elongation factor *(EF-Ts) & original... 0.03 OrthoFinder output from all 47 species
Smo60716 emb2726 Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
Spa_g11112 emb2726 translation elongation factor *(EF-Ts) & original... 0.06 OrthoFinder output from all 47 species
Spa_g21728 emb2726 translation elongation factor *(EF-Ts) & original... 0.07 OrthoFinder output from all 47 species
Tin_g03798 emb2726 translation elongation factor *(EF-Ts) & original... 0.07 OrthoFinder output from all 47 species
Zm00001e010912_P001 emb2726, Zm00001e010912 EF-Ts translation elongation factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEA Interproscan
BP GO:0006414 translational elongation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR003029 S1_domain 266 331
IPR003029 S1_domain 146 215
IPR014039 Transl_elong_EFTs/EF1B_dimer 907 1047
No external refs found!