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  5. Als_g17052

Als_g17052 (ATOFP6, OFP6)


Aliases : ATOFP6, OFP6

Description : transcriptional co-regulator *(OFP) & original description: none


Gene families : OG0000209 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000209_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g17052

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene32012.t1 ATOFP3, OFP3,... transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0064.g035682 ATOFP1, OFP1 transcriptional co-regulator *(OFP) & original... 0.04 OrthoFinder output from all 47 species
Dde_g24834 No alias transcriptional co-regulator *(OFP) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g13562 OFP8, ATOFP8 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13979 OFP8, ATOFP8 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11509 ATOFP7, OFP7 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e027915_P001 ATOFP7, OFP7,... transcription factor (OFP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR006458 Ovate_C 509 565
No external refs found!