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  5. Als_g17266

Als_g17266


Description : clade B phosphatase & original description: none


Gene families : OG0001301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001301_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g17266
Cluster HCCA: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00158970 evm_27.TU.AmTr_v1... Probable protein phosphatase 2C 25 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00065p00110200 evm_27.TU.AmTr_v1... Probable protein phosphatase 2C 25 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00078p00164770 evm_27.TU.AmTr_v1... Probable protein phosphatase 2C 25 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AT2G30020 No alias Protein phosphatase 2C family protein 0.1 OrthoFinder output from all 47 species
AT2G40180 PP2C5, ATHPP2C5 phosphatase 2C5 0.04 OrthoFinder output from all 47 species
Adi_g079500 PP2C5, ATHPP2C5 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g14659 No alias clade B phosphatase & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g07470 No alias clade B phosphatase & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g28060 No alias clade B phosphatase & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g41535 No alias clade B phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07103 No alias clade B phosphatase & original description: none 0.1 OrthoFinder output from all 47 species
Aop_g13821 No alias clade B phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06701.t1 Aspi01Gene06701 clade B phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g05168 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g23461 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g27780 No alias clade B phosphatase & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g39979 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g39980 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g49147 No alias clade B phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27434 No alias clade B phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01024710001 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01036289001 No alias Probable protein phosphatase 2C 74 OS=Oryza sativa... 0.09 OrthoFinder output from all 47 species
Gb_40834 No alias clade B phosphatase 0.05 OrthoFinder output from all 47 species
LOC_Os03g18150.1 LOC_Os03g18150 Probable protein phosphatase 2C 32 OS=Oryza sativa... 0.07 OrthoFinder output from all 47 species
LOC_Os12g09640.1 LOC_Os12g09640 Probable protein phosphatase 2C 77 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Len_g23780 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Lfl_g12331 PP2C5, ATHPP2C5 clade B phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10365511g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10426697g0020 No alias Probable protein phosphatase 2C 2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_10429333g0010 No alias Probable protein phosphatase 2C 2 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_10430806g0020 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_10432464g0020 No alias Probable protein phosphatase 2C 2 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
MA_10435129g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_107720g0010 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_1274g0010 No alias Probable protein phosphatase 2C 2 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
MA_128174g0010 PP2C5, ATHPP2C5 Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_12940g0010 No alias histone (H2B) 0.07 OrthoFinder output from all 47 species
MA_134564g0010 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_1556703g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_166433g0010 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_166433g0020 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_176702g0030 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_177086g0010 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_183946g0010 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_185569g0010 No alias histone (H2B) 0.02 OrthoFinder output from all 47 species
MA_223907g0010 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_3395g0010 No alias Probable protein phosphatase 2C 2 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_87559g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_8880456g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_9501502g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_9664807g0010 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp6g11540.1 No alias clade B phosphatase 0.02 OrthoFinder output from all 47 species
Msp_g10956 PP2C5, ATHPP2C5 clade B phosphatase & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g13572 No alias clade B phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g48663 No alias clade B phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g22849 No alias clade B phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24387 No alias clade B phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33412 PP2C5, ATHPP2C5 clade B phosphatase & original description: none 0.09 OrthoFinder output from all 47 species
Sam_g10522 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g10523 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo13829 No alias Probable protein phosphatase 2C 25 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Smo404120 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc05g052520.3.1 Solyc05g052520 Probable protein phosphatase 2C 30 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc06g007190.4.1 Solyc06g007190 Probable protein phosphatase 2C 2 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc06g082080.3.1 Solyc06g082080 Probable protein phosphatase 2C 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g23587 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08957 PP2C5, ATHPP2C5 clade B phosphatase & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 171 417
No external refs found!