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  5. Als_g17843

Als_g17843 (ATSS4, SS4, SSIV)


Aliases : ATSS4, SS4, SSIV

Description : not classified & original description: none


Gene families : OG0000693 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000693_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g17843

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00037p00164200 ATSS3, SS3,... Carbohydrate metabolism.starch... 0.03 OrthoFinder output from all 47 species
Cre06.g282000 ATSS3, SS3 Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
Cre13.g579598 ATSS3, SS3 Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
GSVIVT01032233001 ATSS4, SS4, SSIV Probable starch synthase 4, chloroplastic/amyloplastic... 0.03 OrthoFinder output from all 47 species
Gb_37508 ATSS4, SS4, SSIV Probable starch synthase 4, chloroplastic/amyloplastic... 0.05 OrthoFinder output from all 47 species
LOC_Os04g53310.1 ATSS3, SS3,... starch synthase (SSIII) 0.02 OrthoFinder output from all 47 species
Ppi_g39876 ATSS4, SS4, SSIV starch synthase *(SS5) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g071040.3.1 ATSS4, SS4,... starch synthase (SSIV) 0.03 OrthoFinder output from all 47 species
Zm00001e039962_P001 ATSS3, SS3,... starch synthase (SSIII) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001296 Glyco_trans_1 437 595
IPR013534 Starch_synth_cat_dom 141 369
No external refs found!