Aliases : ATHDA5, HDA05, HDA5
Description : class-II histone deacetylase & original description: none
Gene families : OG0001559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001559_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aev_g06072 | ATHDA5, HDA05, HDA5 | class-II histone deacetylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g14691 | ATHDA15, HDA15 | class-II histone deacetylase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0250.g060221 | ATHDA15, HDA15 | class-II histone deacetylase & original description: CDS=93-1925 | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g01843 | ATHDA5, HDA05, HDA5 | class-II histone deacetylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g14604 | ATHDA15, HDA15 | class-II histone deacetylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01007870001 | ATHDA5, HDA05, HDA5 | Chromatin organisation.histone modifications.histone... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01008242001 | ATHDA15, HDA15 | Chromatin organisation.histone modifications.histone... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g06980.1 | ATHDA15, HDA15,... | class-II histone deacetylase | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g05654 | ATHDA15, HDA15 | class-II histone deacetylase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Mp1g20110.1 | ATHDA15, HDA15 | class-II histone deacetylase | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g49320 | No alias | class-II histone deacetylase & original description: none | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016409 | palmitoyltransferase activity | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| CC | GO:0030684 | preribosome | IEP | HCCA |
| MF | GO:0031072 | heat shock protein binding | IEP | HCCA |
| CC | GO:0032040 | small-subunit processome | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR023801 | His_deacetylse_dom | 25 | 325 |
| No external refs found! |
