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  5. Pnu_g12129

Pnu_g12129 (ATSTP13, MSS1, STP13)


Aliases : ATSTP13, MSS1, STP13

Description : monosaccharide transporter *(STP) & original description: none


Gene families : OG0000074 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000074_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Pnu_g12129

Target Alias Description ECC score Gene Family Method Actions
Adi_g008724 ATSTP13, MSS1, STP13 monosaccharide transporter *(STP) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g03609 ATSTP1, STP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g22675 STP7 monosaccharide transporter *(STP) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33594 ATSTP13, MSS1, STP13 monosaccharide transporter *(STP) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21298 STP7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_10872 ATSTP4, STP4 monosaccharide transporter (STP) 0.02 OrthoFinder output from all 47 species
Lfl_g26212 No alias monosaccharide transporter *(STP) & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g27640.1 STP7 monosaccharide transporter (STP) 0.02 OrthoFinder output from all 47 species
Mp1g27650.1 STP7 monosaccharide transporter (STP) 0.02 OrthoFinder output from all 47 species
Ppi_g11389 ATSTP13, MSS1, STP13 monosaccharide transporter *(STP) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27187 No alias monosaccharide transporter *(STP) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22820 ATSTP13, MSS1, STP13 monosaccharide transporter *(STP) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009686_P001 AtSTP14, STP14,... monosaccharide transporter (STP) 0.02 OrthoFinder output from all 47 species
Zm00001e040996_P001 Zm00001e040996 monosaccharide transporter (STP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR005828 MFS_sugar_transport-like 30 486
No external refs found!